Detailed information    

insolico Bioinformatically predicted

Overview

Name   pilN   Type   Machinery gene
Locus tag   Q9Q86_RS14810 Genome accession   NZ_CP133162
Coordinates   3049896..3050540 (+) Length   214 a.a.
NCBI ID   WP_004909633.1    Uniprot ID   S7WRY4
Organism   Acinetobacter sp. A22     
Function   assembly of type IV pilus (predicted from homology)   
DNA binding and uptake

Genomic Context

Location: 3044896..3055540
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  Q9Q86_RS14795 - 3045263..3046081 (+) 819 WP_004964610.1 putative RNA methyltransferase -
  Q9Q86_RS14800 ponA 3046096..3048675 (-) 2580 WP_112986739.1 penicillin-binding protein PBP1a -
  Q9Q86_RS14805 pilM 3048838..3049896 (+) 1059 WP_004951546.1 pilus assembly protein PilM Machinery gene
  Q9Q86_RS14810 pilN 3049896..3050540 (+) 645 WP_004909633.1 PilN domain-containing protein Machinery gene
  Q9Q86_RS14815 pilO 3050537..3051277 (+) 741 WP_075696026.1 type 4a pilus biogenesis protein PilO Machinery gene
  Q9Q86_RS14820 pilP 3051277..3051804 (+) 528 WP_004909624.1 pilus assembly protein PilP Machinery gene
  Q9Q86_RS14825 pilQ 3051866..3054004 (+) 2139 WP_171293826.1 type IV pilus secretin PilQ Machinery gene
  Q9Q86_RS14830 aroK 3054024..3054584 (+) 561 WP_112986741.1 shikimate kinase AroK -

Sequence

Protein


Download         Length: 214 a.a.        Molecular weight: 23774.17 Da        Isoelectric Point: 5.1372

>NTDB_id=872210 Q9Q86_RS14810 WP_004909633.1 3049896..3050540(+) (pilN) [Acinetobacter sp. A22]
MAKINLLPWRDELREQRKKQFIAYCVGVAALGVASVLAGWGYLDYKLNDQEQANQLIVSTNQNLDAQLKSLDGLQERRNA
IIERMKLIQGLQGQRPVAVRLIDELVRVTPPTMYLTKFTRTGDKFTIEGKAESPNTVAELLRNLEASPWYRNAFMNSFLA
AEEKKDKTVSSLIPRIEENYGSFVVTVDLGEIGTTVEADPLAETVASGTVGAAQ

Nucleotide


Download         Length: 645 bp        

>NTDB_id=872210 Q9Q86_RS14810 WP_004909633.1 3049896..3050540(+) (pilN) [Acinetobacter sp. A22]
ATGGCAAAGATTAACTTACTCCCTTGGCGTGATGAGCTAAGAGAACAACGAAAGAAACAATTTATTGCATATTGTGTAGG
GGTCGCTGCATTAGGTGTGGCGTCAGTTTTGGCAGGATGGGGTTATCTTGATTACAAATTAAATGATCAAGAACAAGCGA
ACCAACTGATTGTGAGCACAAATCAAAATCTTGATGCTCAATTAAAATCCTTAGATGGCTTGCAAGAGCGACGTAATGCA
ATTATTGAACGGATGAAACTCATTCAAGGATTGCAAGGTCAAAGACCTGTTGCTGTACGTTTAATCGATGAATTGGTGCG
AGTTACTCCGCCAACCATGTATTTGACTAAATTTACACGTACAGGAGATAAGTTCACGATAGAAGGTAAAGCTGAAAGTC
CAAATACGGTTGCTGAGTTACTGAGAAATCTTGAAGCATCGCCGTGGTATCGCAATGCTTTTATGAATTCCTTTTTAGCG
GCTGAAGAGAAAAAAGACAAAACTGTCAGCTCGCTTATACCTCGTATTGAAGAAAACTATGGAAGTTTTGTTGTAACTGT
TGATCTTGGTGAAATAGGTACAACAGTTGAAGCTGACCCATTAGCAGAAACGGTCGCATCAGGAACAGTGGGGGCAGCAC
AATGA

Domains

Predicted by InterproScan.

Fimbrial assembly protein (PilN) (PilN)

(100-169)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB S7WRY4

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  pilN Acinetobacter baumannii D1279779

76.636

100

0.766
  comN Acinetobacter baylyi ADP1

73.333

98.131

0.72