Detailed information    

insolico Bioinformatically predicted

Overview

Name   ceuB   Type   Machinery gene
Locus tag   Q6357_RS19910 Genome accession   NZ_CP130888
Coordinates   3879354..3880304 (-) Length   316 a.a.
NCBI ID   WP_017366964.1    Uniprot ID   A0A9X0FWU4
Organism   Bacillus altitudinis strain 28M1-1     
Function   DNA uptake (predicted from homology)   
DNA binding and uptake

Genomic Context

Location: 3874354..3885304
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  Q6357_RS19890 (Q6357_19890) - 3875599..3876555 (-) 957 WP_007499147.1 LCP family protein -
  Q6357_RS19895 (Q6357_19895) - 3876695..3877639 (-) 945 WP_304717300.1 siderophore ABC transporter substrate-binding protein -
  Q6357_RS19900 (Q6357_19900) - 3877662..3878420 (-) 759 WP_304717302.1 ABC transporter ATP-binding protein -
  Q6357_RS19905 (Q6357_19905) - 3878411..3879361 (-) 951 WP_304717305.1 iron chelate uptake ABC transporter family permease subunit -
  Q6357_RS19910 (Q6357_19910) ceuB 3879354..3880304 (-) 951 WP_017366964.1 ABC transporter permease Machinery gene
  Q6357_RS19915 (Q6357_19915) - 3880464..3880742 (-) 279 WP_024720011.1 barstar family protein -
  Q6357_RS19920 (Q6357_19920) - 3880804..3881973 (-) 1170 WP_304717308.1 MFS transporter -
  Q6357_RS19925 (Q6357_19925) - 3882116..3883555 (+) 1440 WP_304717310.1 PLP-dependent aminotransferase family protein -
  Q6357_RS19930 (Q6357_19930) - 3883586..3884068 (-) 483 WP_008348662.1 hypothetical protein -

Sequence

Protein


Download         Length: 316 a.a.        Molecular weight: 34945.28 Da        Isoelectric Point: 9.7475

>NTDB_id=861572 Q6357_RS19910 WP_017366964.1 3879354..3880304(-) (ceuB) [Bacillus altitudinis strain 28M1-1]
MKLYQLSLLFVCLACASLFVGVQDLSLLQLFHLSDEQMNTLFSSRIPRLMSIVLAGMSLSLCGFIMQSMTRNKFVSPTTA
GTMDWAKLGILTAMLVFTQASPLMKMAIAFLFTLAGNLLFLKILRHIKVNDTIYVPLVGLMFGGIVSSISTFIAYKYDLI
QNVSAWLQGDFSLIVQGRYELLYVSVPLLIIAYLYADRFTVAGMGESFAVNLGLTYKRVMAVGLVIVSMITSVTILTVGM
LPFLGLIIPNIVSIYRGDHLKKSLPHTALLGAIFVLICDVLGRVIIYPYEISVGLMVGIIGSAIFLYMLLRRKRYA

Nucleotide


Download         Length: 951 bp        

>NTDB_id=861572 Q6357_RS19910 WP_017366964.1 3879354..3880304(-) (ceuB) [Bacillus altitudinis strain 28M1-1]
ATGAAGTTGTACCAATTAAGTTTGTTGTTTGTGTGTTTGGCATGTGCGTCGCTGTTTGTCGGAGTACAGGACCTGTCTCT
TTTACAGTTGTTTCATCTATCAGATGAACAAATGAACACCTTATTTTCAAGTCGCATCCCGCGGCTGATGAGTATTGTGC
TTGCTGGCATGAGCCTGAGCTTATGCGGTTTTATCATGCAAAGCATGACGAGAAATAAATTTGTCTCTCCAACGACTGCA
GGAACAATGGATTGGGCCAAGCTGGGTATTTTAACCGCTATGCTTGTTTTTACACAGGCAAGCCCGCTGATGAAAATGGC
GATTGCGTTTTTATTTACGTTAGCTGGCAATCTATTATTCTTAAAAATTCTACGCCATATTAAGGTGAACGATACGATCT
ACGTACCGTTAGTCGGCTTAATGTTTGGCGGAATTGTCAGTTCAATTTCCACGTTTATAGCCTATAAATATGATTTGATC
CAAAACGTATCCGCATGGCTGCAAGGGGATTTTTCTCTTATTGTTCAGGGGCGTTATGAACTGCTCTATGTGAGTGTTCC
TCTATTGATCATCGCGTATTTATATGCTGACCGCTTTACAGTGGCTGGTATGGGTGAGAGCTTTGCCGTCAATTTAGGTT
TAACGTATAAACGTGTCATGGCAGTTGGTTTGGTGATTGTTTCGATGATTACGTCTGTAACGATTTTGACTGTTGGCATG
CTGCCATTCCTCGGCTTAATCATTCCGAATATTGTATCGATCTACCGAGGGGATCACTTGAAAAAGAGCCTTCCGCATAC
GGCTTTATTAGGGGCCATTTTTGTGCTCATATGTGATGTACTCGGACGGGTGATCATTTATCCATATGAAATATCTGTCG
GGCTTATGGTTGGCATCATTGGAAGTGCGATCTTCCTGTACATGTTATTAAGGAGGAAGCGCTATGCATAA

Domains

Predicted by InterproScan.

FecCD transport family (FecCD)

(10-311)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  ceuB Campylobacter jejuni subsp. jejuni 81-176

52

94.937

0.494