Detailed information    

insolico Bioinformatically predicted

Overview

Name   htrA   Type   Regulator
Locus tag   WBM82_RS17740 Genome accession   NZ_CP147494
Coordinates   3327758..3329134 (-) Length   458 a.a.
NCBI ID   WP_029725912.1    Uniprot ID   -
Organism   Bacillus subtilis strain YT1     
Function   require for competence development (predicted from homology)   
Competence regulation

Genomic Context

Location: 3322758..3334134
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  WBM82_RS17715 (WBM82_17765) feuV 3322799..3323626 (-) 828 WP_010886609.1 ABC transporter ATP-binding protein -
  WBM82_RS17720 (WBM82_17770) cotNW 3323844..3324281 (-) 438 WP_029725909.1 YusW family protein -
  WBM82_RS17725 (WBM82_17775) - 3324391..3326187 (-) 1797 WP_029725910.1 M3 family oligoendopeptidase -
  WBM82_RS17730 (WBM82_17780) yusZ 3326322..3327164 (+) 843 WP_029725911.1 oxidoreductase -
  WBM82_RS17735 (WBM82_17785) mrgA 3327254..3327715 (+) 462 WP_303393443.1 metalloregulation DNA-binding stress protein MgrA -
  WBM82_RS17740 (WBM82_17790) htrA 3327758..3329134 (-) 1377 WP_029725912.1 serine protease Do-like protein HtrB Regulator
  WBM82_RS17745 (WBM82_17795) cssR 3329412..3330089 (+) 678 WP_003228529.1 secretion stress-responsive two-component system response regulator CssR -
  WBM82_RS17750 (WBM82_17800) cssS 3330086..3331441 (+) 1356 WP_003228527.1 secretion stress-responsive two-component system sensor histidine kinase CssS -
  WBM82_RS17755 (WBM82_17805) spxO 3331469..3331633 (-) 165 WP_003221681.1 anti-adapter protein SpxO -
  WBM82_RS17760 (WBM82_17810) yuxN 3331801..3332676 (+) 876 WP_003243192.1 TetR/AcrR family transcriptional regulator -
  WBM82_RS17765 (WBM82_17815) fumC 3332716..3334104 (-) 1389 WP_003228523.1 class II fumarate hydratase -

Sequence

Protein


Download         Length: 458 a.a.        Molecular weight: 48747.21 Da        Isoelectric Point: 4.5582

>NTDB_id=859575 WBM82_RS17740 WP_029725912.1 3327758..3329134(-) (htrA) [Bacillus subtilis strain YT1]
MDYRRDGQNDQHQTEPSHTEQQNTENQKLIGHSEQELLDAPVSYEAGRQETASALEMEKQETAVKKEKKRRAAWLSPILG
GIIGGGLMLGIAPYLPSDQNQTTETASANKQVQSDNFTTAPITNASNIADMVEDLEPTIVGISNIQTSQNNTFGTGGGSS
SESESGTGSGVIFKKDSDKAYIITNNHVVEGANKLTVTLYNGETETAKLVGSDTITDLAVLEISGKNVKKVASFGDSSQL
RTGEKVIAIGNPLGQQFSGTVTQGIISGLNRTIDVDTTQGTVEMNVLQTDAAINPGNSGGPLINASGQVIGINSLKVSES
GVESLGFAIPSNDVEPIVDQLLQNGKVDRPFLGVQMIDMSQVPETYQENTLGLFGDQLGKGVYVKEVQANSPAEKAGIKS
EDVIVKLNGKDVESSADIRQILYKDLKVGDKTTIQVLRKGKTKTLNATLTKQTESSSS

Nucleotide


Download         Length: 1377 bp        

>NTDB_id=859575 WBM82_RS17740 WP_029725912.1 3327758..3329134(-) (htrA) [Bacillus subtilis strain YT1]
TTGGATTATCGACGTGATGGCCAAAACGATCAACATCAAACTGAACCTTCACATACAGAACAGCAGAATACAGAAAACCA
GAAGCTGATTGGACATTCTGAACAAGAATTGCTTGACGCGCCTGTGTCGTATGAAGCGGGACGGCAGGAAACGGCTTCTG
CTTTAGAAATGGAAAAGCAAGAAACGGCTGTGAAAAAAGAAAAGAAACGGAGAGCCGCATGGCTGAGCCCGATTTTAGGC
GGTATTATCGGCGGGGGCCTCATGCTTGGCATCGCGCCTTATCTGCCGTCAGACCAAAATCAGACGACCGAGACCGCTTC
CGCAAATAAACAGGTGCAGTCTGATAATTTTACAACGGCGCCGATAACGAACGCATCAAACATCGCTGATATGGTAGAGG
ATTTAGAGCCTACGATTGTCGGAATCTCAAATATCCAAACCTCTCAAAATAACACATTCGGCACGGGAGGAGGCTCCAGC
TCAGAAAGTGAAAGCGGAACCGGTTCAGGTGTCATTTTCAAAAAAGACAGCGATAAAGCGTATATCATTACAAACAACCA
TGTCGTTGAAGGCGCGAACAAACTGACTGTTACGCTATACAACGGAGAAACGGAAACTGCCAAGCTTGTCGGCAGCGATA
CCATTACTGATTTGGCAGTTTTGGAAATCAGCGGCAAGAACGTCAAAAAAGTGGCGAGCTTTGGTGATTCTTCGCAGCTG
CGCACTGGCGAAAAGGTAATCGCTATCGGTAACCCGCTCGGACAGCAGTTTTCCGGTACGGTGACACAAGGCATCATTAG
CGGACTGAACCGGACAATTGATGTGGATACAACACAAGGGACGGTGGAAATGAACGTGCTGCAAACCGATGCAGCGATCA
ATCCGGGGAACAGCGGAGGCCCATTAATCAATGCAAGCGGCCAGGTCATCGGCATCAACAGCTTGAAGGTGAGCGAAAGC
GGCGTGGAATCACTTGGATTTGCGATCCCAAGCAATGATGTCGAGCCAATTGTTGACCAGCTGCTGCAAAACGGGAAGGT
GGACCGTCCGTTTTTAGGCGTGCAGATGATTGACATGTCACAAGTTCCTGAAACCTATCAGGAAAATACGCTCGGCCTGT
TTGGAGATCAATTGGGCAAAGGTGTTTATGTAAAAGAAGTTCAAGCAAATTCGCCGGCAGAAAAAGCAGGTATTAAATCT
GAGGATGTCATTGTCAAACTAAACGGTAAAGACGTGGAAAGCAGTGCGGATATCCGTCAGATCCTTTACAAAGACTTAAA
AGTCGGAGATAAAACAACAATCCAAGTGCTGCGAAAGGGAAAAACGAAAACGTTGAACGCGACACTGACCAAGCAGACAG
AAAGCAGTTCAAGCTAA

Domains

Predicted by InterProScan.

PDZ domain (PDZ_2)

(350-449)

Trypsin-like peptidase domain (Trypsin_2)

(168-312)

Peptidase family M50 (Peptidase_M50)

(282-455)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  htrA Streptococcus mutans UA159

41.353

87.118

0.36