Detailed information NTG0853994

Bioinformatically predicted

Overview

• Name: dprA
• Type: Machinery gene
• Locus tag: QYM01_RS05065
• Genome accession: NZ_CP129527
• Coordinates: 1055213..1056058 (+)
• Length: 281 a.a.
• NCBI ID: WP_043983543.1
• Uniprot ID: A0A380JPG7
• Organism: Streptococcus equi subsp. zooepidemicus strain BJ-1
• Function: ssDNA binding; loading RecA onto ssDNA (predicted from homology) DNA processing

Genomic Context

Location: 1050213..1061058

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
QYM01_RS05050 (QYM01_05050)	-	1051713..1052345 (+)	633	WP_301899119.1	ABC transporter ATP-binding protein	-
QYM01_RS05055 (QYM01_05055)	ylqF	1053335..1054192 (+)	858	WP_206158626.1	ribosome biogenesis GTPase YlqF	-
QYM01_RS05060 (QYM01_05060)	-	1054173..1054955 (+)	783	WP_206159083.1	ribonuclease HII	-
QYM01_RS05065 (QYM01_05065)	dprA	1055213..1056058 (+)	846	WP_043983543.1	DNA-processing protein DprA	Machinery gene
QYM01_RS05070 (QYM01_05070)	topA	1056159..1058291 (+)	2133	WP_206158627.1	type I DNA topoisomerase	-
QYM01_RS05075 (QYM01_05075)	-	1058406..1059053 (+)	648	WP_037581215.1	SatD family protein	-
QYM01_RS05080 (QYM01_05080)	-	1059074..1059787 (+)	714	WP_301899120.1	DUF3307 domain-containing protein	-

Sequence

Protein

• Length: 281 a.a.
• Molecular weight: 31334.24 Da
• Isoelectric Point: 8.8540

>NTDB_id=853994 QYM01_RS05065 WP_043983543.1 1055213..1056058(+) (dprA) [Streptococcus equi subsp. zooepidemicus strain BJ-1]
MNNFELYKLKKAGLTNLNILNLIDYQQRNNKSLSLRDMAVVSCCKNPVLFIETYKQLNVALLKKEFNQFPSLSILDKQYP
LALREIYNPPVLLFYQGDLSLLEKPKLAVVGSRESSEIGTRSVYKIVKELKNHFVIVSGLARGIDTSAHLACLKAGGQTI
AVIGTGLDRYYPKENHQLQEFLSQRHLVLSEYGAGEAALSYHFPERNRIIAGLSRGVLVVEAKQRSGSLITCQLAMEEGR
DIFVVPDNILNGTSAGCLKLIKDGASCVTHGRDILSEYHYS

Nucleotide

• Length: 846 bp

>NTDB_id=853994 QYM01_RS05065 WP_043983543.1 1055213..1056058(+) (dprA) [Streptococcus equi subsp. zooepidemicus strain BJ-1]
ATGAATAATTTTGAACTTTATAAATTAAAAAAGGCTGGGCTAACTAATTTAAATATTCTTAACCTGATTGACTACCAGCA
GCGTAATAACAAGTCTCTATCCCTTAGAGATATGGCAGTGGTTTCTTGCTGCAAAAATCCAGTTTTATTTATTGAGACCT
ACAAGCAATTAAATGTCGCCTTGTTAAAAAAGGAATTCAACCAGTTTCCGAGCTTATCTATCCTAGATAAGCAATACCCA
TTGGCCTTGAGGGAAATCTATAATCCTCCTGTTTTACTCTTTTATCAAGGTGATTTAAGCCTGTTAGAAAAGCCTAAGCT
GGCAGTCGTTGGCTCTAGAGAATCCAGTGAAATTGGGACGCGGTCTGTTTACAAAATCGTCAAAGAGCTTAAGAATCACT
TTGTCATTGTAAGTGGACTTGCTAGAGGTATTGATACCAGTGCTCATCTCGCTTGCTTGAAAGCAGGTGGGCAAACTATA
GCTGTTATCGGGACTGGCCTAGATCGCTACTATCCAAAGGAAAATCACCAGCTACAGGAGTTTTTATCTCAGCGTCATCT
CGTGCTCAGTGAATATGGGGCTGGAGAGGCCGCCTTGTCTTATCATTTCCCTGAAAGAAACCGTATTATCGCAGGTCTTA
GTCGAGGTGTCCTTGTTGTTGAGGCTAAGCAGCGCTCTGGCTCTTTGATTACCTGTCAGCTAGCTATGGAAGAGGGACGT
GATATTTTTGTCGTACCTGACAATATTCTTAATGGGACATCAGCGGGCTGTTTGAAGCTGATCAAAGATGGTGCCAGCTG
TGTCACTCATGGCAGAGACATTCTTTCAGAATACCACTATTCTTAA

Domains

Predicted by InterproScan.

• DNA processing protein A sterile alpha motif domain (SAM_DprA) (1-61)

• DNA recombination-mediator protein A (DNA_processg_A) (71-269)

3D structure

• AlphaFold DB: A0A380JPG7

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
dprA	Streptococcus mutans UA159	68.571	99.644	0.683
dprA/cilB/dalA	Streptococcus mitis SK321	58.929	99.644	0.587
dprA/cilB/dalA	Streptococcus pneumoniae D39	58.571	99.644	0.584
dprA/cilB/dalA	Streptococcus pneumoniae R6	58.571	99.644	0.584
dprA/cilB/dalA	Streptococcus pneumoniae TIGR4	58.571	99.644	0.584
dprA/cilB/dalA	Streptococcus pneumoniae Rx1	58.571	99.644	0.584
dprA/cilB/dalA	Streptococcus mitis NCTC 12261	58.214	99.644	0.58
dprA	Lactococcus lactis subsp. cremoris KW2	57.295	100	0.573
dprA	Bacillus subtilis subsp. subtilis str. 168	42.4	88.968	0.377