Detailed information NTG0853538

Bioinformatically predicted

Overview

• Name: recD/recD2/recDB
• Type: Machinery gene
• Locus tag: V6U65_RS08755
• Genome accession: NZ_CP145863
• Coordinates: 1918602..1921106 (+)
• Length: 834 a.a.
• NCBI ID: WP_410532379.1
• Uniprot ID: -
• Organism: Streptococcus salivarius strain KSS6
• Function: homologous recombination (predicted from homology) Homologous recombination

Genomic Context

Location: 1913602..1926106

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
V6U65_RS08735 (V6U65_08730)	-	1915821..1916363 (-)	543	WP_002884677.1	CvpA family protein	-
V6U65_RS08740 (V6U65_08735)	zapA	1916360..1916674 (-)	315	WP_004183554.1	cell division protein ZapA	-
V6U65_RS08745 (V6U65_08740)	rnhC	1916991..1917881 (+)	891	WP_410532378.1	ribonuclease HIII	-
V6U65_RS08750 (V6U65_08745)	lepB	1917900..1918541 (+)	642	WP_104021369.1	signal peptidase I	-
V6U65_RS08755 (V6U65_08750)	recD/recD2/recDB	1918602..1921106 (+)	2505	WP_410532379.1	ATP-dependent RecD-like DNA helicase	Machinery gene
V6U65_RS08760 (V6U65_08755)	-	1921159..1921485 (-)	327	WP_104021371.1	AzlD domain-containing protein	-
V6U65_RS08765 (V6U65_08760)	-	1921472..1922170 (-)	699	WP_375335565.1	AzlC family ABC transporter permease	-
V6U65_RS08770 (V6U65_08765)	tsaD	1922216..1923229 (-)	1014	WP_073687371.1	tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex transferase subunit TsaD	-
V6U65_RS08775 (V6U65_08770)	rimI	1923229..1923684 (-)	456	WP_037611259.1	ribosomal protein S18-alanine N-acetyltransferase	-
V6U65_RS08780 (V6U65_08775)	tsaB	1923644..1924330 (-)	687	WP_049527796.1	tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex dimerization subunit type 1 TsaB	-
V6U65_RS08785 (V6U65_08780)	-	1924591..1924821 (+)	231	WP_022495963.1	DNA-dependent RNA polymerase subunit epsilon	-

Sequence

Protein

• Length: 834 a.a.
• Molecular weight: 94161.43 Da
• Isoelectric Point: 4.4334

>NTDB_id=853538 V6U65_RS08755 WP_410532379.1 1918602..1921106(+) (recD/recD2/recDB) [Streptococcus salivarius strain KSS6]
MQEFYFSGTIERVIFENASNFFRILLLEIDETDSDFEDYEIIVTGTMGDVMEGEDYTFWGQITNHPKYGEQLQMTRYERS
KPSASGLIKYFASDNFKGIGKKTAERIVEIYGEDPIDKILEDPSKLEQISNLSKVNREAFVAKLKINYGTEQILSKLSSY
GLTPKAASQIFNQYKEESLNLIEEHPYLLVEEVQGIGFKIADQLAERLGIASDAPERLRAALIHCLLEASMEEGDTYIEA
KSLLERTIILLESARQIELDPALVAKELTNLIQEDKVQNIETKIFDNTLYFAEQGIYTHLTRIMKDQPDISAEDKIQASL
EEVEEELGITYDKVQKDAIIKALQSKVFILTGGPGTGKTTVINGIIKTYADLHGLDLKKSDLPIILAAPTGRAARRMNEL
TQLPSATIHRHLGLNSEDDFKTLEDYLDCDLIIIDEFSMVDTWLANQLFESISDSTQVVIVGDQDQLPSVGPGQVLADLL
QIDDLPKVSLTKIFRQSEDSTIVTLASQMRQGQLPADFTEKKADRSYFEANANHIPQMVPKIVSAAIKSGIAAQDVQILA
PMYRGQAGINNLNTIMQDLLNPQEKANQFAFNDIFFRKNDKILHLVNDTELNVFNGDIGIITDLIPGKYTESKQDEIYMS
FDGNEVIYPRNEWNKITLAYAMSIHKSQGSEFPVVILPITRQSGRMLQRNLIYTAITRAKNKLVMLGEIAAFDYAVRNEG
AKRNTFLIQRFEQTYTQAVDKSVEKIVKNEATEAPNQTKTKNNYPSETFENKDFSENINPSPDLVNTYSQPVDKSVNKPV
QTEENYRLTEENWATIDPMIGLSEDDIADFFNNN

Nucleotide

• Length: 2505 bp

>NTDB_id=853538 V6U65_RS08755 WP_410532379.1 1918602..1921106(+) (recD/recD2/recDB) [Streptococcus salivarius strain KSS6]
ATGCAAGAATTCTATTTTTCAGGAACTATCGAACGCGTCATTTTCGAAAACGCCAGTAATTTTTTCCGTATTCTACTCTT
AGAAATTGACGAAACAGACAGTGATTTTGAGGACTATGAAATCATTGTCACAGGAACCATGGGAGATGTCATGGAGGGCG
AAGATTATACCTTCTGGGGTCAGATAACCAATCATCCCAAATATGGTGAACAGCTCCAAATGACACGCTACGAACGGTCT
AAACCTTCTGCTAGCGGTCTTATCAAGTATTTCGCCAGCGACAATTTTAAGGGGATTGGTAAGAAAACAGCTGAGCGTAT
TGTCGAGATCTATGGCGAAGACCCAATTGACAAGATTCTCGAAGATCCTAGCAAGTTAGAGCAGATTTCCAACCTTTCAA
AGGTAAACCGAGAAGCCTTCGTTGCAAAGTTAAAAATCAACTATGGAACCGAACAAATCTTGTCCAAACTTTCCAGCTAT
GGACTCACACCAAAAGCTGCCTCACAAATTTTCAATCAATATAAGGAAGAATCGCTCAACCTTATCGAGGAACACCCTTA
TCTCTTGGTAGAGGAAGTTCAAGGAATCGGATTTAAAATAGCTGACCAACTAGCCGAACGCTTAGGAATTGCTAGTGATG
CTCCTGAACGTTTACGAGCTGCCTTGATTCATTGTCTGCTAGAAGCTAGCATGGAAGAAGGCGACACCTATATCGAAGCC
AAATCCTTGCTTGAACGAACTATCATCCTTTTGGAAAGTGCTCGTCAGATTGAACTTGACCCCGCCTTAGTCGCGAAGGA
ATTAACCAATCTCATCCAAGAGGACAAAGTGCAAAATATAGAAACTAAAATCTTTGATAATACCCTATATTTTGCGGAAC
AGGGCATCTATACCCACCTAACTCGTATCATGAAAGACCAACCTGACATCAGTGCAGAGGACAAAATCCAAGCAAGTCTT
GAAGAGGTGGAAGAGGAGCTTGGTATTACTTATGATAAGGTTCAAAAAGATGCCATTATCAAAGCCCTACAAAGCAAGGT
CTTCATCCTGACAGGTGGTCCCGGGACAGGTAAAACCACCGTTATTAACGGAATCATTAAAACTTATGCCGACCTTCATG
GTCTAGATCTCAAAAAGTCTGATTTGCCTATTATTTTAGCGGCACCAACAGGACGGGCTGCTCGTCGAATGAACGAACTC
ACCCAACTCCCTAGTGCCACTATCCATAGACATTTGGGACTCAATAGCGAGGACGATTTCAAGACCTTAGAGGACTATCT
CGATTGCGACTTGATTATCATCGATGAGTTTTCTATGGTTGATACTTGGTTGGCCAATCAACTCTTTGAAAGTATCTCTG
ATTCAACCCAAGTCGTCATTGTGGGTGACCAAGACCAACTGCCTTCCGTAGGCCCTGGCCAGGTCTTGGCTGACCTTTTG
CAGATTGATGACTTGCCTAAGGTTTCTCTGACCAAAATTTTCAGACAATCTGAGGACTCCACCATCGTTACCCTAGCTAG
TCAGATGCGTCAAGGCCAACTACCCGCTGATTTCACAGAGAAAAAGGCTGACCGCTCTTACTTTGAGGCCAATGCCAACC
ATATTCCACAGATGGTCCCTAAAATTGTCTCTGCCGCTATAAAGAGCGGGATTGCTGCTCAGGATGTGCAGATTCTAGCT
CCCATGTATCGAGGACAGGCCGGTATCAACAATCTCAATACCATTATGCAGGACCTACTTAATCCTCAAGAAAAGGCCAA
TCAGTTTGCCTTTAATGATATTTTCTTCCGTAAGAACGACAAAATTCTCCATCTGGTCAACGATACCGAACTCAATGTCT
TCAATGGCGACATCGGCATCATTACCGATCTCATCCCTGGTAAATATACTGAAAGCAAGCAGGACGAAATTTACATGTCC
TTTGATGGCAATGAGGTTATCTATCCTCGTAACGAATGGAATAAGATTACTCTGGCCTATGCCATGTCAATCCACAAATC
CCAAGGGAGTGAGTTTCCAGTCGTTATCCTTCCCATCACACGACAAAGTGGACGTATGCTACAACGTAACCTCATCTACA
CCGCTATCACACGCGCCAAGAATAAGCTAGTCATGTTAGGGGAAATCGCAGCCTTTGATTATGCCGTTCGCAACGAAGGA
GCTAAACGAAATACTTTTCTCATCCAACGTTTTGAACAAACTTATACACAAGCTGTTGATAAGTCTGTCGAAAAGATTGT
TAAAAACGAGGCAACAGAGGCACCCAATCAAACAAAAACGAAAAACAACTACCCCTCAGAAACCTTTGAAAACAAAGACT
TTTCGGAAAATATCAATCCATCCCCAGATCTTGTTAACACTTATTCACAACCTGTGGATAAGTCTGTTAACAAACCTGTG
CAAACAGAAGAAAACTATCGTTTAACTGAAGAAAATTGGGCAACTATAGATCCAATGATTGGTCTCAGTGAAGACGATAT
TGCTGATTTTTTTAACAATAACTAA

Domains

Predicted by InterProScan.

• Helix-hairpin-helix containing domain (HHH_RecD2) (147-237)

• UvrD-like helicase C-terminal domain (UvrD_C_2) (659-705)

• ATP-dependent RecD-like DNA helicase SH3 domain (SH3_13) (572-638)

• AAA domain (AAA_30) (331-523)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
recD/recD2/recDB	Bacillus subtilis subsp. subtilis str. 168	45.067	89.928	0.405