Detailed information NTG0852973

Bioinformatically predicted

Overview

• Name: clpE
• Type: Regulator
• Locus tag: V6T01_RS08185
• Genome accession: NZ_CP145856
• Coordinates: 1777689..1779794 (-)
• Length: 701 a.a.
• NCBI ID: WP_070579628.1
• Uniprot ID: -
• Organism: Streptococcus salivarius strain KSS1
• Function: repress competence development (at the early growth phase) (predicted from homology) Competence regulation

Genomic Context

Location: 1772689..1784794

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
V6T01_RS08155 (V6T01_08130)	trmB	1772996..1773637 (-)	642	WP_151404302.1	tRNA (guanosine(46)-N7)-methyltransferase TrmB	-
V6T01_RS08160 (V6T01_08135)	ccrZ	1773647..1774438 (-)	792	WP_002884270.1	cell cycle regulator CcrZ	-
V6T01_RS08165 (V6T01_08140)	pptB	1774496..1775533 (-)	1038	WP_410541670.1	ABC transporter permease	Regulator
V6T01_RS08170 (V6T01_08145)	pptA	1775530..1776261 (-)	732	WP_270616748.1	ABC transporter ATP-binding protein	Regulator
V6T01_RS08175 (V6T01_08150)	-	1776326..1776745 (+)	420	WP_037599159.1	HIT family protein	-
V6T01_RS08180 (V6T01_08155)	-	1776742..1777041 (+)	300	WP_014634939.1	hypothetical protein	-
V6T01_RS08185 (V6T01_08160)	clpE	1777689..1779794 (-)	2106	WP_070579628.1	AAA family ATPase	Regulator
V6T01_RS08190 (V6T01_08165)	-	1780530..1781621 (-)	1092	WP_410541347.1	nucleotidyltransferase	-
V6T01_RS08195 (V6T01_08170)	-	1781639..1783450 (-)	1812	WP_060972578.1	NACHT domain-containing protein	-
V6T01_RS08200 (V6T01_08175)	-	1783491..1784231 (-)	741	WP_014634945.1	class I SAM-dependent DNA methyltransferase	-
V6T01_RS08205 (V6T01_08180)	rsfS	1784436..1784789 (-)	354	WP_014632696.1	ribosome silencing factor	-

Sequence

Protein

• Length: 701 a.a.
• Molecular weight: 77333.27 Da
• Isoelectric Point: 4.7718

>NTDB_id=852973 V6T01_RS08185 WP_070579628.1 1777689..1779794(-) (clpE) [Streptococcus salivarius strain KSS1]
MNNNFNNMDDLFNQLMGNMGGYRSENRRYMINGREVTPEEFAIYRQTGQLPGNEGEAVNPTQHQGKGPKQDGILAKLGRN
LTEEAREGKLDPVIGRNKEIQEACEILARRTKNNPVLVGDAGVGKTAVVEGLAQAIVNGDVPAAIKNKEIISIDISGLEA
GTQYRGSFEENIQNLVNEVKEAGNIILFFDEIHQILGAGSTGDGQGSKGLADILKPALSRGELTVIGATTQDEYRNTILK
NAALARRFNEVKVNAPSAEDTFKILQGIRDLYEKHHNVILPDDVLKAAVDFSVQYIPQRSLPDKAIDLVDVTAAHLAAQH
PVTDVNAVEHEIEEEKAKQEAAAAKEDYEAALNAKVRIEELEKKIANHTADLKVTATVNDVAESVERMTGIPVSQMGATD
IERLKDMGHRLQTKVIGQDKAVEAVARAIRRNRAGFDEGNRPIGSFLFVGPTGVGKTELAKQLALDMFGTKDAIIRLDMS
EYSDRTAVSKLIGTTAGYVGYDDNSNTLTERVRRNPYSIVLLDEIEKADPQVITLLLQVLDDGRLTDGQGNTVNFKNTVI
IATSNAGFGYEANLTEDADKPELMDRLKPYFRPEFLNRFNAVIEFSHLSKEDLSKIVDLMLVEVNKTLSKKDIDLAVSEA
AKEYMTEEGYDEVMGVRPLRRVVEQQIRDKVTDFHLDNLDAKHLEADMEDGVLVIKEKDAK

Nucleotide

• Length: 2106 bp

>NTDB_id=852973 V6T01_RS08185 WP_070579628.1 1777689..1779794(-) (clpE) [Streptococcus salivarius strain KSS1]
ATGAACAACAACTTTAACAATATGGATGATCTTTTCAATCAATTGATGGGTAACATGGGTGGTTACCGTTCAGAAAACCG
TCGCTACATGATTAACGGTCGTGAAGTGACACCTGAAGAATTTGCTATCTACCGTCAAACAGGTCAATTGCCTGGTAATG
AGGGTGAAGCAGTGAACCCAACTCAACATCAAGGTAAAGGACCTAAACAAGATGGTATCCTTGCTAAACTTGGTCGTAAC
TTGACTGAAGAAGCTCGCGAAGGTAAATTGGATCCAGTTATCGGACGTAACAAAGAAATCCAAGAAGCTTGCGAAATCTT
AGCTCGTCGTACTAAGAATAACCCAGTCCTTGTCGGGGACGCTGGTGTTGGTAAAACAGCTGTAGTTGAAGGTTTGGCTC
AAGCTATCGTTAATGGTGATGTCCCAGCTGCTATCAAGAACAAAGAAATCATCTCAATCGATATTTCTGGACTTGAAGCT
GGTACGCAATACCGTGGTAGCTTTGAAGAAAACATTCAAAACTTGGTAAATGAAGTCAAAGAAGCTGGAAATATCATTCT
CTTCTTCGATGAAATCCACCAAATTCTTGGTGCCGGAAGCACTGGCGATGGCCAAGGCTCTAAAGGTCTTGCTGATATCT
TGAAACCTGCTCTTTCACGTGGTGAATTGACAGTGATTGGTGCAACAACTCAAGATGAATACCGTAACACTATCTTGAAG
AACGCTGCTCTTGCTCGTCGTTTCAACGAAGTTAAGGTTAATGCTCCTTCTGCTGAAGATACTTTCAAGATTCTCCAAGG
TATTCGTGATCTTTATGAAAAACACCACAATGTTATCTTGCCAGATGATGTTTTGAAAGCAGCAGTAGATTTCTCTGTCC
AATATATTCCACAACGTAGCTTGCCAGATAAGGCTATCGACCTTGTCGATGTGACAGCGGCTCACTTGGCTGCTCAACAC
CCAGTGACTGATGTGAATGCTGTTGAACATGAAATCGAAGAAGAAAAAGCTAAACAAGAAGCTGCAGCTGCCAAAGAAGA
CTACGAAGCAGCTCTAAACGCTAAAGTTCGTATTGAAGAACTTGAAAAGAAAATTGCTAACCATACAGCAGACCTTAAAG
TCACAGCAACTGTTAACGATGTGGCTGAATCTGTAGAACGTATGACTGGTATTCCAGTGTCACAAATGGGTGCAACTGAT
ATCGAACGTTTGAAAGATATGGGTCACCGTTTGCAAACTAAGGTTATCGGTCAAGATAAAGCCGTTGAAGCAGTGGCACG
TGCCATCCGTCGTAACCGTGCAGGATTTGACGAAGGTAACCGTCCAATTGGTAGCTTCCTCTTTGTAGGACCTACTGGTG
TTGGTAAAACTGAGTTGGCTAAACAATTGGCTCTTGATATGTTCGGAACTAAAGATGCTATCATCCGTTTGGATATGTCA
GAATACAGCGACCGCACAGCCGTTTCTAAATTGATTGGTACAACAGCTGGTTATGTTGGTTATGATGACAATAGCAATAC
TTTGACAGAACGTGTTCGCCGTAACCCATACTCAATCGTCCTTCTCGACGAAATTGAAAAGGCTGACCCTCAAGTTATCA
CACTTCTTCTCCAAGTTTTGGATGATGGTCGTTTGACTGATGGTCAAGGTAACACTGTAAACTTCAAGAATACTGTGATT
ATCGCAACTTCAAACGCAGGATTTGGCTATGAAGCTAACTTGACAGAAGATGCTGATAAACCAGAACTTATGGATCGTTT
GAAACCTTACTTCCGTCCAGAATTCCTTAACCGTTTCAATGCTGTCATCGAATTCTCACACTTGAGCAAAGAAGATCTTT
CTAAGATTGTAGACCTTATGTTGGTTGAAGTTAACAAGACTCTTTCTAAGAAAGACATTGACTTGGCAGTTAGCGAAGCT
GCTAAAGAATACATGACTGAAGAAGGCTACGATGAAGTCATGGGTGTTCGTCCACTCCGCCGTGTGGTTGAACAACAAAT
CCGTGACAAAGTCACAGACTTCCACTTGGATAACCTTGATGCTAAACACCTAGAAGCTGATATGGAAGATGGTGTCTTGG
TTATCAAAGAAAAAGATGCTAAATAA

Domains

Predicted by InterProScan.

• AAA lid domain (AAA_lid_9) (257-351)

• C-terminal, D2-small domain, of ClpB protein (ClpB_D2-small) (608-678)

• AAA domain (Cdc48 subfamily) (AAA_2) (441-601)

• ATPase family associated with various cellular activities (AAA) (AAA) (116-248)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
clpE	Streptococcus mutans UA159	46.648	100	0.466
clpC	Lactococcus lactis subsp. cremoris KW2	49.002	92.867	0.455
clpE	Streptococcus pneumoniae D39	48.678	91.726	0.447
clpE	Streptococcus pneumoniae R6	48.678	91.726	0.447
clpE	Streptococcus pneumoniae TIGR4	48.678	91.726	0.447
clpE	Streptococcus pneumoniae Rx1	48.678	91.726	0.447
clpC	Bacillus subtilis subsp. subtilis str. 168	45.666	92.154	0.421
clpC	Lactococcus lactis subsp. lactis strain DGCC12653	42.089	92.867	0.391
clpC	Streptococcus pneumoniae TIGR4	43.087	88.73	0.382
clpC	Streptococcus pneumoniae Rx1	43.087	88.73	0.382
clpC	Streptococcus pneumoniae D39	43.087	88.73	0.382
clpC	Streptococcus thermophilus LMD-9	43.436	88.017	0.382
clpC	Streptococcus thermophilus LMG 18311	42.973	88.302	0.379
clpC	Streptococcus mutans UA159	42.332	89.301	0.378