Detailed information NTG0848864

Bioinformatically predicted

Overview

• Name: comEA
• Type: Machinery gene
• Locus tag: QTN52_RS13235
• Genome accession: NZ_CP128551
• Coordinates: 2681698..2682312 (-)
• Length: 204 a.a.
• NCBI ID: WP_017418180.1
• Uniprot ID: -
• Organism: Bacillus velezensis strain SRCM123441
• Function: dsDNA binding to the cell surface (predicted from homology) DNA binding and uptake

Genomic Context

Location: 2676698..2687312

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
QTN52_RS13205 (QTN52_13205)	rpsT	2677001..2677267 (+)	267	WP_003152876.1	30S ribosomal protein S20	-
QTN52_RS13210 (QTN52_13210)	holA	2677284..2678325 (-)	1042	Protein_2559	DNA polymerase III subunit delta	-
QTN52_RS13215 (QTN52_13215)	-	2678365..2678516 (-)	152	Protein_2560	hypothetical protein	-
QTN52_RS13220 (QTN52_13220)	-	2678557..2678691 (+)	135	WP_003152870.1	YqzM family protein	-
QTN52_RS13225 (QTN52_13225)	comEC	2678710..2681061 (-)	2352	WP_017418179.1	DNA internalization-related competence protein ComEC/Rec2	Machinery gene
QTN52_RS13230 (QTN52_13230)	-	2681062..2681631 (-)	570	WP_003152868.1	ComE operon protein 2	-
QTN52_RS13235 (QTN52_13235)	comEA	2681698..2682312 (-)	615	WP_017418180.1	helix-hairpin-helix domain-containing protein	Machinery gene
QTN52_RS13240 (QTN52_13240)	comER	2682371..2683192 (+)	822	WP_014305449.1	late competence protein ComER	-
QTN52_RS13245 (QTN52_13245)	-	2683261..2683998 (-)	738	WP_014305450.1	class I SAM-dependent methyltransferase	-
QTN52_RS13250 (QTN52_13250)	rsfS	2683995..2684351 (-)	357	WP_003152864.1	ribosome silencing factor	-
QTN52_RS13255 (QTN52_13255)	yqeK	2684348..2684929 (-)	582	WP_017418181.1	bis(5'-nucleosyl)-tetraphosphatase (symmetrical) YqeK	-
QTN52_RS13260 (QTN52_13260)	-	2684919..2685488 (-)	570	WP_017418182.1	nicotinate-nucleotide adenylyltransferase	-
QTN52_RS13265 (QTN52_13265)	yhbY	2685499..2685789 (-)	291	WP_003152858.1	ribosome assembly RNA-binding protein YhbY	-
QTN52_RS13270 (QTN52_13270)	aroE	2685783..2686625 (-)	843	WP_017418183.1	shikimate dehydrogenase	-

Sequence

Protein

• Length: 204 a.a.
• Molecular weight: 22218.33 Da
• Isoelectric Point: 5.4841

>NTDB_id=848864 QTN52_RS13235 WP_017418180.1 2681698..2682312(-) (comEA) [Bacillus velezensis strain SRCM123441]
MTKAMMTERLRRNLKILGACLAAGAVFICIWLFRSEKEEPVKQQSVLGQTASASVADKKDTADDKIMIDVKGAVRNPGVY
EMKAGDRVTQAIEKAGGLKKKADELNVNLAEQLQDGTIVYIPSEGEEENHPKTAVGEKENAAVNINTASLDELQAISGVG
QKKAEAIIAYREENGRFQTAEDLMNVSGFGEKSFERIKTSITVK

Nucleotide

• Length: 615 bp

>NTDB_id=848864 QTN52_RS13235 WP_017418180.1 2681698..2682312(-) (comEA) [Bacillus velezensis strain SRCM123441]
ATGACGAAAGCGATGATGACGGAGCGGCTGCGGCGGAACCTGAAAATTCTGGGCGCTTGTCTTGCGGCAGGGGCGGTTTT
TATCTGTATTTGGCTGTTTCGTTCTGAAAAGGAAGAGCCGGTCAAACAGCAGTCCGTGCTCGGCCAAACAGCCTCGGCAT
CCGTCGCGGACAAAAAAGACACCGCAGACGATAAGATTATGATTGATGTGAAAGGCGCGGTCCGAAATCCCGGCGTGTAT
GAAATGAAAGCGGGAGACAGAGTGACGCAAGCCATTGAAAAAGCCGGAGGCCTGAAGAAAAAGGCGGATGAATTGAATGT
TAATTTAGCAGAGCAGCTGCAGGACGGGACGATTGTTTATATTCCGAGTGAAGGCGAAGAAGAGAATCACCCGAAAACAG
CAGTGGGTGAAAAGGAGAATGCAGCTGTCAATATCAATACGGCATCTTTGGACGAACTTCAGGCGATTTCCGGGGTGGGG
CAGAAAAAAGCGGAAGCCATTATCGCCTACCGAGAAGAAAACGGACGGTTTCAGACTGCTGAAGATTTGATGAATGTATC
AGGCTTTGGAGAAAAGTCATTTGAGCGGATAAAAACTTCCATTACGGTAAAGTGA

Domains

Predicted by InterproScan.

• Helix-hairpin-helix motif (HHH_3) (141-202)

• SLBB domain (SLBB) (68-122)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
comEA	Bacillus subtilis subsp. subtilis str. 168	58.854	94.118	0.554
comEA/celA/cilE	Streptococcus pneumoniae TIGR4	35.545	100	0.368
comEA/celA/cilE	Streptococcus mitis SK321	35.071	100	0.363