Detailed information    

insolico Bioinformatically predicted

Overview

Name   comS   Type   Regulator
Locus tag   QTN52_RS01780 Genome accession   NZ_CP128551
Coordinates   347371..347535 (+) Length   54 a.a.
NCBI ID   WP_269194677.1    Uniprot ID   -
Organism   Bacillus velezensis strain SRCM123441     
Function   preventing the degradation of ComK (predicted from homology)   
Competence regulation

Genomic Context

Location: 342371..352535
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  QTN52_RS01775 (QTN52_01775) srfAB 344316..347306 (+) 2991 Protein_309 surfactin non-ribosomal peptide synthetase SrfAB -
  QTN52_RS01780 (QTN52_01780) comS 347371..347535 (+) 165 WP_269194677.1 competence protein ComS Regulator

Sequence

Protein


Download         Length: 54 a.a.        Molecular weight: 6211.19 Da        Isoelectric Point: 11.7559

>NTDB_id=848821 QTN52_RS01780 WP_269194677.1 347371..347535(+) (comS) [Bacillus velezensis strain SRCM123441]
MRARRSSSLNRSDKRLIRSIILFPQHSAGCISLISSDRPARATTSLLYFCWKDQ

Nucleotide


Download         Length: 165 bp        

>NTDB_id=848821 QTN52_RS01780 WP_269194677.1 347371..347535(+) (comS) [Bacillus velezensis strain SRCM123441]
ATGAGAGCGAGGAGGAGCAGCAGTTTGAACCGATCCGACAAGCGCCTTATCAGAAGCATTATCCTGTTTCCTCAGCACAG
CGCAGGATGTATATCCTTAATCAGCTCGGACAGGCCAGCACGAGCTACAACGTCCCTGCTGTACTTCTGCTGGAAGGATC
AGTAG

Domains

Predicted by InterproScan.

Bacillus competence protein S (ComS)

(9-52)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  comS Bacillus subtilis subsp. subtilis str. 168

58.696

85.185

0.5