Detailed information    

insolico Bioinformatically predicted

Overview

Name   comA   Type   Regulator
Locus tag   QTN49_RS04800 Genome accession   NZ_CP128504
Coordinates   946618..947262 (+) Length   214 a.a.
NCBI ID   WP_014418762.1    Uniprot ID   A0A2Z4EIP2
Organism   Bacillus velezensis strain SRCM123434     
Function   promoting transcription of comS (predicted from homology)   
Competence regulation

Genomic Context

Location: 941618..952262
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  QTN49_RS04775 (QTN49_04775) - 942048..942389 (-) 342 WP_014418765.1 hypothetical protein -
  QTN49_RS04780 (QTN49_04780) degQ 942854..942994 (+) 141 WP_003152043.1 degradation enzyme regulation protein DegQ Regulator
  QTN49_RS04785 (QTN49_04785) - 943125..944021 (+) 897 WP_017419425.1 polyprenyl synthetase family protein -
  QTN49_RS04790 (QTN49_04790) comX 944036..944212 (+) 177 WP_017419424.1 competence pheromone ComX -
  QTN49_RS04795 (QTN49_04795) comP 944231..946537 (+) 2307 WP_065180455.1 sensor histidine kinase Regulator
  QTN49_RS04800 (QTN49_04800) comA 946618..947262 (+) 645 WP_014418762.1 response regulator transcription factor Regulator
  QTN49_RS04805 (QTN49_04805) - 947284..947667 (+) 384 WP_104842774.1 hotdog fold thioesterase -
  QTN49_RS04810 (QTN49_04810) mnhG 947707..948081 (-) 375 WP_003152056.1 monovalent cation/H(+) antiporter subunit G -
  QTN49_RS04815 (QTN49_04815) - 948065..948349 (-) 285 WP_012118311.1 Na(+)/H(+) antiporter subunit F1 -
  QTN49_RS04820 (QTN49_04820) - 948349..948825 (-) 477 WP_070082285.1 Na+/H+ antiporter subunit E -
  QTN49_RS04825 (QTN49_04825) - 948831..950312 (-) 1482 WP_151140054.1 Na+/H+ antiporter subunit D -
  QTN49_RS04830 (QTN49_04830) - 950305..950646 (-) 342 WP_003152063.1 Na(+)/H(+) antiporter subunit C -
  QTN49_RS04835 (QTN49_04835) - 950646..951077 (-) 432 WP_087634939.1 Na(+)/H(+) antiporter subunit B -

Sequence

Protein


Download         Length: 214 a.a.        Molecular weight: 24302.70 Da        Isoelectric Point: 4.9953

>NTDB_id=847980 QTN49_RS04800 WP_014418762.1 946618..947262(+) (comA) [Bacillus velezensis strain SRCM123434]
MKKILVIDDHPAVMEGTKTILETDTNLSVDCLSPDASEQFVLRHDFSAYDLILMDLNLGDDISGIELSKKILKENPLCKI
IVYTGYEVEDYFEESIRAGLHGAISKTESKEKIMQYIYHVLNGQILVDFSYFKQLMTQQKTKTSSSPQSEQDRLTQRERH
ILQEVEKGLTNQEIADALHLSKRSIEYSLTSIFNKLNVGSRTEAVLIAKSDNVL

Nucleotide


Download         Length: 645 bp        

>NTDB_id=847980 QTN49_RS04800 WP_014418762.1 946618..947262(+) (comA) [Bacillus velezensis strain SRCM123434]
ATGAAAAAGATACTAGTGATTGATGATCATCCGGCTGTCATGGAGGGCACCAAGACGATTCTGGAAACGGACACGAATCT
TTCTGTCGATTGCCTCAGTCCTGATGCCAGTGAACAATTCGTTCTCCGGCATGATTTTTCAGCTTACGATCTCATATTAA
TGGATTTAAATCTGGGTGATGACATCAGCGGCATAGAGCTTTCCAAGAAAATCTTAAAAGAGAATCCTCTCTGTAAAATC
ATTGTCTACACAGGCTATGAGGTTGAAGATTATTTTGAAGAATCCATCCGCGCGGGCCTGCATGGCGCCATCAGTAAAAC
CGAATCTAAAGAGAAAATCATGCAATACATATATCACGTGCTCAACGGACAGATTTTAGTTGATTTCTCCTATTTCAAAC
AGCTGATGACCCAGCAAAAAACAAAAACGTCTTCTTCCCCTCAAAGTGAGCAGGATCGGTTAACACAGAGAGAGCGCCAT
ATTCTCCAAGAGGTCGAAAAAGGTTTGACCAATCAGGAAATCGCAGATGCGCTTCACTTAAGCAAGCGGTCGATTGAATA
CAGCCTGACATCCATTTTTAATAAGCTGAATGTCGGCTCCCGCACTGAAGCGGTGCTGATCGCCAAGTCAGATAACGTAC
TATAA

Domains

Predicted by InterproScan.

Response regulator receiver domain (Response_reg)

(4-117)

Bacterial regulatory proteins, luxR family (GerE)

(153-208)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A2Z4EIP2

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  comA Bacillus subtilis subsp. subtilis str. 168

85.981

100

0.86