Detailed information    

insolico Bioinformatically predicted

Overview

Name   comZ   Type   Regulator
Locus tag   QRY57_RS07565 Genome accession   NZ_CP127376
Coordinates   1199768..1199941 (+) Length   57 a.a.
NCBI ID   WP_026590461.1    Uniprot ID   -
Organism   Bacillus arachidis strain YX15     
Function   repression of comG operon (predicted from homology)   
Competence regulation

Genomic Context

Location: 1194768..1204941
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  QRY57_RS07545 (QRY57_07550) clpB 1195085..1197685 (+) 2601 WP_286017099.1 ATP-dependent chaperone ClpB -
  QRY57_RS07550 (QRY57_07555) - 1197722..1197904 (-) 183 WP_016113766.1 YjzD family protein -
  QRY57_RS07555 (QRY57_07560) - 1198062..1198796 (+) 735 WP_286017100.1 alpha/beta hydrolase -
  QRY57_RS07560 (QRY57_07565) - 1198854..1199714 (+) 861 WP_286017101.1 NAD(P)-dependent oxidoreductase -
  QRY57_RS07565 (QRY57_07570) comZ 1199768..1199941 (+) 174 WP_026590461.1 ComZ family protein Regulator
  QRY57_RS07570 (QRY57_07575) fabH 1200060..1200992 (+) 933 WP_286017102.1 beta-ketoacyl-ACP synthase III -
  QRY57_RS07575 (QRY57_07580) fabF 1201023..1202261 (+) 1239 WP_286017103.1 beta-ketoacyl-ACP synthase II -
  QRY57_RS07580 (QRY57_07585) - 1202560..1203063 (+) 504 WP_208017813.1 SMI1/KNR4 family protein -
  QRY57_RS07585 (QRY57_07590) - 1203318..1204106 (+) 789 WP_286017104.1 DUF2268 domain-containing putative Zn-dependent protease -

Sequence

Protein


Download         Length: 57 a.a.        Molecular weight: 6417.59 Da        Isoelectric Point: 4.6472

>NTDB_id=843774 QRY57_RS07565 WP_026590461.1 1199768..1199941(+) (comZ) [Bacillus arachidis strain YX15]
MNEKNMQFLQIAMKHLPEAKAILDDNGIALDMEKAQPVLELLMKVMDEAYELGKAGK

Nucleotide


Download         Length: 174 bp        

>NTDB_id=843774 QRY57_RS07565 WP_026590461.1 1199768..1199941(+) (comZ) [Bacillus arachidis strain YX15]
ATGAATGAAAAAAATATGCAGTTTTTACAAATCGCTATGAAACACCTGCCAGAAGCAAAGGCAATTTTAGATGATAATGG
GATTGCACTTGATATGGAAAAAGCACAACCAGTACTAGAGTTATTAATGAAAGTAATGGATGAAGCATATGAACTTGGAA
AAGCGGGAAAATAA

Domains

Predicted by InterproScan.

ComZ (ComZ)

(3-55)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  comZ Bacillus subtilis subsp. subtilis str. 168

59.259

94.737

0.561