Detailed information NTG0841083

Bioinformatically predicted

Overview

• Name: rapF
• Type: Regulator
• Locus tag: QQF37_RS16760
• Genome accession: NZ_CP126986
• Coordinates: 3420456..3421601 (+)
• Length: 381 a.a.
• NCBI ID: WP_074534220.1
• Uniprot ID: -
• Organism: Bacillus velezensis strain MC2S-6
• Function: inhibit the DNA-binding function of ComA (predicted from homology) Competence regulation

Genomic Context

Location: 3415456..3426601

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
QQF37_RS16740 (QQF37_16740)	-	3416353..3416781 (-)	429	WP_032869448.1	DUF1934 domain-containing protein	-
QQF37_RS16745 (QQF37_16745)	-	3416935..3417447 (+)	513	Protein_3267	bacteriocin biosynthesis protein AlbG	-
QQF37_RS16750 (QQF37_16750)	-	3417454..3418830 (-)	1377	WP_032875890.1	YncE family protein	-
QQF37_RS16755 (QQF37_16755)	-	3418870..3420225 (-)	1356	WP_032875887.1	YncE family protein	-
QQF37_RS16760 (QQF37_16760)	rapF	3420456..3421601 (+)	1146	WP_074534220.1	Rap family tetratricopeptide repeat protein	Regulator
QQF37_RS16765 (QQF37_16765)	-	3421585..3421704 (+)	120	WP_017418707.1	PhrC/PhrF family phosphatase-inhibitory pheromone	-
QQF37_RS16770 (QQF37_16770)	speB	3421827..3422699 (-)	873	WP_032875884.1	agmatinase	-
QQF37_RS16775 (QQF37_16775)	speE	3422758..3423588 (-)	831	WP_003151052.1	spermidine synthase	-
QQF37_RS16780 (QQF37_16780)	-	3423788..3425860 (+)	2073	WP_032875881.1	transglycosylase domain-containing protein	-
QQF37_RS16785 (QQF37_16785)	-	3425885..3426318 (-)	434	Protein_3275	hypothetical protein	-

Sequence

Protein

• Length: 381 a.a.
• Molecular weight: 45737.21 Da
• Isoelectric Point: 5.0614

>NTDB_id=841083 QQF37_RS16760 WP_074534220.1 3420456..3421601(+) (rapF) [Bacillus velezensis strain MC2S-6]
MASVLSSSAVGEKINEWYMYIRRFSIPDAEYLRREIKEELAGLEDDQDLHLYYSLMEFRHNLMLEYLEPLESQRIEEQPR
LSDLLADIDKKQARLTGRLDYYFNFFRGMYELECREYLSAIQFFKKAESKLTYVKDHIEKAEFYFKMSEVYYYMKQTYVS
MDYARQAYLIYKDAEKYNIRLTQCHSLFGANYLDVKQYDHAISHFQKAYTMAELEQQPQLMGRTLFNIALCHNNQNNKVE
AIPHLKEAIAVFEKAQMSHSLPQPYFLLTQIYFKLKNIDNAYDYHKKGISICKEIDDIIYEEKFKFLEYLYMPDPRDTLI
NDCLHFLENKLMYADIEELALDVAKYYYTQEEYKKASVYFLKVEEARQQIEGGVNLYEIEV

Nucleotide

• Length: 1146 bp

>NTDB_id=841083 QQF37_RS16760 WP_074534220.1 3420456..3421601(+) (rapF) [Bacillus velezensis strain MC2S-6]
GTGGCGAGTGTTTTATCATCTTCAGCGGTTGGAGAAAAAATCAACGAATGGTATATGTACATTCGAAGGTTCAGCATCCC
GGACGCCGAGTACTTGCGGAGAGAAATCAAAGAAGAACTTGCAGGTCTGGAAGATGATCAGGATCTTCATCTATACTATT
CTCTCATGGAATTCCGTCACAATCTGATGCTCGAATACCTCGAACCGCTGGAATCGCAGCGGATAGAAGAACAGCCGAGA
CTATCGGATCTGCTCGCGGATATTGATAAAAAGCAGGCCCGGCTGACCGGACGTCTTGATTATTATTTTAATTTTTTCCG
GGGGATGTATGAGCTGGAATGCCGTGAATATCTTTCAGCGATTCAGTTTTTTAAGAAAGCTGAAAGCAAACTGACGTACG
TTAAAGATCATATAGAAAAAGCTGAATTTTACTTTAAAATGTCAGAAGTCTATTATTATATGAAACAAACTTATGTATCG
ATGGATTATGCGCGGCAGGCTTATTTAATTTATAAAGATGCAGAAAAATATAATATTAGATTAACCCAGTGCCATTCTTT
ATTTGGGGCTAATTATCTTGATGTAAAGCAATACGATCACGCGATTTCCCACTTTCAAAAGGCATATACGATGGCTGAAT
TGGAGCAGCAGCCGCAATTAATGGGGAGGACACTTTTTAACATCGCTTTATGCCATAATAATCAAAACAATAAAGTCGAG
GCTATTCCCCATTTAAAAGAAGCCATAGCTGTTTTTGAAAAAGCTCAAATGAGTCATTCACTTCCGCAGCCCTACTTCTT
ACTTACACAGATTTATTTTAAGTTAAAAAATATAGATAACGCGTACGATTATCATAAAAAAGGTATCTCAATATGTAAGG
AAATAGATGATATAATTTACGAGGAAAAATTTAAATTTTTAGAATACTTGTATATGCCGGATCCAAGAGATACATTAATA
AACGATTGTCTGCATTTTCTTGAAAATAAATTGATGTATGCTGATATTGAGGAATTAGCCCTTGATGTAGCTAAATATTA
TTACACACAAGAAGAATATAAAAAAGCTTCTGTCTACTTTTTAAAGGTTGAAGAAGCCAGACAGCAGATCGAAGGAGGAG
TGAATTTATATGAAATTGAAGTATAA

Domains

Predicted by InterproScan.

• response regulator aspartate phosphatase H, N terminal (RapH_N) (5-65)

• Tetratricopeptide repeat (TPR_12) (188-254)

• Tetratricopeptide repeat (TPR_8) (265-293)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
rapF	Bacillus subtilis subsp. subtilis str. 168	70.079	100	0.701
rapC	Bacillus subtilis subsp. subtilis str. 168	54.211	99.738	0.541