Detailed information    

insolico Bioinformatically predicted

Overview

Name   sxy/tfoX   Type   Regulator
Locus tag   QPR83_RS07870 Genome accession   NZ_CP126850
Coordinates   1687702..1688328 (+) Length   208 a.a.
NCBI ID   WP_017384804.1    Uniprot ID   A0AA37AJW2
Organism   Enterobacter hormaechei strain Ehh_7     
Function   positive regulator of competence gene (predicted from homology)   
Competence regulation

Genomic Context

Location: 1682702..1693328
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  QPR83_RS07850 (QPR83_07860) - 1683102..1684862 (-) 1761 WP_033487273.1 Lon protease family protein -
  QPR83_RS07855 (QPR83_07865) matP 1685049..1685501 (+) 453 WP_006809347.1 macrodomain Ter protein MatP -
  QPR83_RS07860 (QPR83_07870) ompA 1685567..1686619 (-) 1053 WP_017694761.1 porin OmpA -
  QPR83_RS07865 (QPR83_07875) sulA 1686976..1687485 (-) 510 WP_026094322.1 SOS-induced cell division inhibitor SulA -
  QPR83_RS07870 (QPR83_07880) sxy/tfoX 1687702..1688328 (+) 627 WP_017384804.1 TfoX/Sxy family DNA transformation protein Regulator
  QPR83_RS07875 (QPR83_07885) yccS 1688285..1690447 (-) 2163 WP_015570895.1 YccS family putative transporter -
  QPR83_RS07880 (QPR83_07890) - 1690466..1690912 (-) 447 WP_003858149.1 YccF domain-containing protein -
  QPR83_RS07885 (QPR83_07895) helD 1691035..1693089 (+) 2055 WP_033487272.1 DNA helicase IV -

Sequence

Protein


Download         Length: 208 a.a.        Molecular weight: 24018.63 Da        Isoelectric Point: 9.4592

>NTDB_id=840253 QPR83_RS07870 WP_017384804.1 1687702..1688328(+) (sxy/tfoX) [Enterobacter hormaechei strain Ehh_7]
MKKISYDRIYQSQEYLSPLGEIHHRALFGGYTLAVDEAVFAMVSDGELYLRACEQSAKYCVKNASSFLTLMKRGRPVLLN
YYRVDEGLWQNREKLLQLSSFALDAARKERYQRHQRNRLKDLPNLTFQIEVLLMEAGITNEETLRQLGAKTSWLKMRSKN
KALSIRVLFALEGAIEGLHEAALPADIRRELMEWFNALPESQGHHSAR

Nucleotide


Download         Length: 627 bp        

>NTDB_id=840253 QPR83_RS07870 WP_017384804.1 1687702..1688328(+) (sxy/tfoX) [Enterobacter hormaechei strain Ehh_7]
ATGAAAAAGATATCTTATGATCGGATTTATCAATCTCAGGAATACCTCTCTCCGCTGGGCGAAATTCATCATCGCGCCCT
GTTTGGCGGTTATACCCTGGCCGTGGATGAAGCGGTGTTCGCGATGGTGTCTGACGGCGAGCTGTACCTTCGCGCCTGTG
AGCAAAGTGCAAAATACTGTGTAAAAAACGCCTCCTCTTTTCTGACCCTGATGAAACGAGGACGGCCAGTGCTGCTTAAT
TACTACCGTGTGGATGAAGGTCTGTGGCAAAACAGGGAAAAGCTGCTTCAGCTCTCCTCGTTTGCGCTCGATGCCGCCAG
GAAAGAGCGCTACCAGCGCCATCAGCGTAACCGGCTTAAGGATCTGCCGAACCTGACCTTTCAGATTGAGGTCCTGCTTA
TGGAGGCGGGCATTACCAATGAAGAGACGCTACGACAGTTGGGGGCGAAGACGAGCTGGCTGAAAATGCGCTCTAAGAAT
AAAGCGCTGAGTATCCGGGTATTGTTCGCGCTTGAAGGCGCCATCGAAGGGTTACATGAAGCGGCACTCCCGGCGGATAT
TCGCCGGGAGCTTATGGAGTGGTTTAATGCGCTGCCTGAGTCGCAGGGCCATCATTCCGCCAGGTAG

Domains

Predicted by InterproScan.

TfoX N-terminal domain (TfoX_N)

(14-106)

TfoX C-terminal domain (TfoX_C)

(116-194)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  sxy/tfoX Escherichia coli BW25113 strain K-12

58.911

97.115

0.572