Detailed information    

insolico Bioinformatically predicted

Overview

Name   pilZ   Type   Machinery gene
Locus tag   K9U73_RS10265 Genome accession   NZ_CP140615
Coordinates   2201641..2201997 (+) Length   118 a.a.
NCBI ID   WP_003091119.1    Uniprot ID   A0A0H2ZD30
Organism   Pseudomonas aeruginosa strain 14182     
Function   assembly of type IV pilus (predicted from homology)   
DNA binding and uptake

Genomic Context

Location: 2196641..2206997
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  K9U73_RS10240 (K9U73_010240) fabF 2196853..2198097 (+) 1245 WP_003104132.1 beta-ketoacyl-ACP synthase II -
  K9U73_RS10245 (K9U73_010245) pabC 2198097..2198912 (+) 816 WP_003110198.1 aminodeoxychorismate lyase -
  K9U73_RS10250 (K9U73_010250) mltG 2198918..2199967 (+) 1050 WP_003104128.1 endolytic transglycosylase MltG -
  K9U73_RS10255 (K9U73_010255) tmk 2199996..2200628 (+) 633 WP_023086060.1 dTMP kinase -
  K9U73_RS10260 (K9U73_010260) - 2200621..2201607 (+) 987 WP_003104126.1 DNA polymerase III subunit delta' -
  K9U73_RS10265 (K9U73_010265) pilZ 2201641..2201997 (+) 357 WP_003091119.1 PilZ domain-containing protein Machinery gene
  K9U73_RS10270 (K9U73_010270) - 2202012..2202788 (+) 777 WP_003091117.1 TatD family hydrolase -
  K9U73_RS10275 (K9U73_010275) - 2203014..2204147 (-) 1134 WP_016263280.1 aminotransferase class V-fold PLP-dependent enzyme -
  K9U73_RS10280 (K9U73_010280) - 2204233..2204871 (+) 639 WP_003091114.1 TetR/AcrR family transcriptional regulator -
  K9U73_RS10285 (K9U73_010285) - 2205021..2205143 (+) 123 Protein_2034 radical SAM protein -
  K9U73_RS10290 (K9U73_010290) gmtY 2205301..2206683 (+) 1383 WP_075117044.1 gamma-mobile-trio recombinase GmtY -

Sequence

Protein


Download         Length: 118 a.a.        Molecular weight: 12903.98 Da        Isoelectric Point: 9.9969

>NTDB_id=835534 K9U73_RS10265 WP_003091119.1 2201641..2201997(+) (pilZ) [Pseudomonas aeruginosa strain 14182]
MSLPPNLGPRNGILSLTIKDKSVLYAAYMPFIRNGGLFIPTNKNYKLGDEVFMLLNLMEEPEKIPVAGKVVWITPKGAQG
NRAAGIGVQFNDGDNTARNKIETYLAGALKSDRPTHTM

Nucleotide


Download         Length: 357 bp        

>NTDB_id=835534 K9U73_RS10265 WP_003091119.1 2201641..2201997(+) (pilZ) [Pseudomonas aeruginosa strain 14182]
ATGAGTTTGCCACCCAATCTGGGGCCGCGTAACGGCATCCTGTCCTTGACCATCAAGGACAAGTCCGTGCTGTACGCCGC
CTACATGCCGTTCATCAGGAACGGCGGGCTGTTCATTCCCACCAACAAGAACTACAAGCTCGGCGACGAAGTCTTCATGC
TGCTCAACCTGATGGAAGAGCCGGAGAAGATCCCGGTGGCCGGCAAGGTCGTCTGGATCACCCCGAAGGGCGCCCAGGGC
AACCGTGCGGCTGGCATCGGCGTGCAGTTCAACGACGGTGACAACACCGCCCGCAACAAGATCGAAACCTACCTGGCCGG
GGCGCTGAAGTCGGACCGGCCGACCCACACGATGTAA

Domains

Predicted by InterProScan.

PilZ domain (PilZ)

(17-106)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A0H2ZD30

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  pilZ Legionella pneumophila str. Paris

49.074

91.525

0.449
  pilZ Legionella pneumophila strain ERS1305867

49.074

91.525

0.449