Detailed information NTG0083122

Bioinformatically predicted

Overview

• Name: comR
• Type: Regulator
• Locus tag: R8615_RS00300
• Genome accession: NZ_AP026929
• Coordinates: 47035..47928 (+)
• Length: 297 a.a.
• NCBI ID: WP_000343888.1
• Uniprot ID: -
• Organism: Streptococcus pneumoniae strain PZ900701114
• Function: activate transcription of comX (predicted from homology) Competence regulation

Genomic Context

Location: 42035..52928

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
R8615_RS00260 (PC1101_00480)	-	42348..43517 (+)	1170	WP_000366342.1	pyridoxal phosphate-dependent aminotransferase	-
R8615_RS00265 (PC1101_00490)	recO	43514..44284 (+)	771	WP_000616164.1	DNA repair protein RecO	Machinery gene
R8615_RS00270 (PC1101_00500)	plsX	44281..45273 (+)	993	WP_000717458.1	phosphate acyltransferase PlsX	-
R8615_RS00275 (PC1101_00510)	-	45279..45512 (+)	234	WP_000136447.1	acyl carrier protein	-
R8615_RS00280 (PC1101_00520)	-	45549..45848 (+)	300	Protein_48	transposase family protein	-
R8615_RS00285 (PC1101_00530)	blpU	46051..46281 (+)	231	WP_001093487.1	bacteriocin-like peptide BlpU	-
R8615_RS00290	-	46284..46409 (+)	126	WP_000346297.1	PncF family bacteriocin immunity protein	-
R8615_RS00295	-	46820..47014 (+)	195	WP_000756776.1	hypothetical protein	-
R8615_RS00300 (PC1101_00540)	comR	47035..47928 (+)	894	WP_000343888.1	XRE family transcriptional regulator	Regulator
R8615_RS00305 (PC1101_00550)	-	48471..48767 (+)	297	WP_000837726.1	uberolysin/carnocyclin family circular bacteriocin	-
R8615_RS00310	-	48774..49910 (+)	1137	WP_000698828.1	hypothetical protein	-
R8615_RS00315 (PC1101_00560)	-	49907..50389 (+)	483	WP_001232094.1	stage II sporulation protein M	-
R8615_RS00320 (PC1101_00570)	-	50386..50982 (+)	597	WP_000687787.1	ATP-binding cassette domain-containing protein	-
R8615_RS00325 (PC1101_00580)	-	50963..51454 (+)	492	WP_000671990.1	hypothetical protein	-

Sequence

Protein

• Length: 297 a.a.
• Molecular weight: 34517.01 Da
• Isoelectric Point: 4.6498

>NTDB_id=83122 R8615_RS00300 WP_000343888.1 47035..47928(+) (comR) [Streptococcus pneumoniae strain PZ900701114]
MDELKREIGYKIKTIRRSCGKTQIDICGDESELTIRQLARIENGQALATLPKLLLIADKLGVSLQNIVDVKVIEIPKGFL
KLKDELIHSQTYADKGRIERKEAILEEIYENYYENLPEEEQLIVDVTQARFDIYGSSDVTYGLGLVEEYFQQLLKKKYFS
VNDLLIIELYFFCCAMGLEDKEHFEELAQKVLLCSEYEDKASLVQMEKVLLSLFIQIQTEDSLIYIQTFEKIIAKTRHVF
YRPHLFLLKAKYALFVDKNILEAESFYEKAISLAELLDDQVLVQRILAEKQIDFPTT

Nucleotide

• Length: 894 bp

>NTDB_id=83122 R8615_RS00300 WP_000343888.1 47035..47928(+) (comR) [Streptococcus pneumoniae strain PZ900701114]
ATGGATGAGTTGAAACGTGAAATTGGTTATAAAATCAAAACTATTAGGCGATCTTGTGGAAAAACTCAGATAGATATTTG
TGGTGATGAATCAGAGTTGACGATTCGTCAGCTAGCACGTATTGAAAATGGGCAAGCTTTAGCAACACTTCCTAAATTAT
TATTGATTGCGGATAAACTTGGAGTATCATTACAGAATATTGTGGATGTTAAGGTTATAGAGATTCCAAAAGGATTCCTA
AAACTCAAAGATGAGCTGATTCATTCTCAAACCTACGCTGATAAGGGAAGAATCGAACGAAAAGAAGCTATACTTGAGGA
AATATATGAAAACTATTATGAGAATTTGCCTGAGGAAGAGCAGTTAATTGTGGATGTGACACAAGCTCGTTTTGATATTT
ATGGTAGTTCAGATGTGACCTACGGTTTAGGGTTAGTGGAAGAATATTTCCAGCAGTTATTAAAAAAGAAATATTTTTCT
GTAAATGATTTGTTGATTATTGAATTGTATTTCTTTTGTTGTGCTATGGGATTAGAAGATAAAGAACATTTTGAGGAGTT
AGCTCAAAAAGTATTGCTATGTTCAGAATATGAAGATAAGGCTAGCCTAGTTCAAATGGAAAAAGTTCTTCTGAGCCTAT
TTATCCAAATTCAGACAGAAGATAGTCTGATATATATTCAAACATTTGAGAAAATTATTGCTAAAACAAGACATGTTTTT
TACCGACCTCATCTATTTTTGCTAAAGGCAAAATATGCTTTATTTGTAGACAAGAATATTTTAGAGGCAGAAAGTTTCTA
TGAAAAGGCGATTTCTCTAGCAGAATTGCTAGACGATCAGGTATTAGTTCAGAGAATTTTAGCAGAAAAACAGATAGATT
TCCCAACAACCTGA

Domains

Predicted by InterProScan.

• ComR tetratricopeptide (ComR_TPR) (76-289)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
comR	Streptococcus mutans UA159	36.667	100	0.37