Detailed information NTG0083001

Bioinformatically predicted

Overview

• Name: comR
• Type: Regulator
• Locus tag: R8623_RS00295
• Genome accession: NZ_AP026928
• Coordinates: 46767..47660 (+)
• Length: 297 a.a.
• NCBI ID: WP_000343888.1
• Uniprot ID: -
• Organism: Streptococcus pneumoniae strain PZ900700406
• Function: activate transcription of comX (predicted from homology) Competence regulation

Genomic Context

Location: 41767..52660

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
R8623_RS00255 (PC0401_00480)	-	42082..43251 (+)	1170	WP_000366376.1	pyridoxal phosphate-dependent aminotransferase	-
R8623_RS00260 (PC0401_00490)	recO	43248..44018 (+)	771	WP_000616164.1	DNA repair protein RecO	Machinery gene
R8623_RS00265 (PC0401_00500)	plsX	44015..45007 (+)	993	WP_000717464.1	phosphate acyltransferase PlsX	-
R8623_RS00270 (PC0401_00510)	-	45013..45246 (+)	234	WP_000136447.1	acyl carrier protein	-
R8623_RS00275 (PC0401_00520)	-	45283..45582 (+)	300	Protein_47	transposase family protein	-
R8623_RS00280	blpU	45785..46015 (+)	231	Protein_48	bacteriocin-like peptide BlpU	-
R8623_RS00285	-	46018..46143 (+)	126	WP_001840490.1	PncF family bacteriocin immunity protein	-
R8623_RS00290	-	46552..46746 (+)	195	WP_000756776.1	hypothetical protein	-
R8623_RS00295 (PC0401_00530)	comR	46767..47660 (+)	894	WP_000343888.1	XRE family transcriptional regulator	Regulator
R8623_RS00300 (PC0401_00540)	-	48203..48488 (+)	286	Protein_52	uberolysin/carnocyclin family circular bacteriocin	-
R8623_RS00305	-	48495..49631 (+)	1137	WP_000698828.1	hypothetical protein	-
R8623_RS00310 (PC0401_00550)	-	49628..50110 (+)	483	WP_001232094.1	stage II sporulation protein M	-
R8623_RS00315 (PC0401_00560)	-	50107..50703 (+)	597	WP_000687787.1	ATP-binding cassette domain-containing protein	-
R8623_RS00320 (PC0401_00570)	-	50684..51175 (+)	492	WP_000671990.1	hypothetical protein	-

Sequence

Protein

• Length: 297 a.a.
• Molecular weight: 34517.01 Da
• Isoelectric Point: 4.6498

>NTDB_id=83001 R8623_RS00295 WP_000343888.1 46767..47660(+) (comR) [Streptococcus pneumoniae strain PZ900700406]
MDELKREIGYKIKTIRRSCGKTQIDICGDESELTIRQLARIENGQALATLPKLLLIADKLGVSLQNIVDVKVIEIPKGFL
KLKDELIHSQTYADKGRIERKEAILEEIYENYYENLPEEEQLIVDVTQARFDIYGSSDVTYGLGLVEEYFQQLLKKKYFS
VNDLLIIELYFFCCAMGLEDKEHFEELAQKVLLCSEYEDKASLVQMEKVLLSLFIQIQTEDSLIYIQTFEKIIAKTRHVF
YRPHLFLLKAKYALFVDKNILEAESFYEKAISLAELLDDQVLVQRILAEKQIDFPTT

Nucleotide

• Length: 894 bp

>NTDB_id=83001 R8623_RS00295 WP_000343888.1 46767..47660(+) (comR) [Streptococcus pneumoniae strain PZ900700406]
ATGGATGAGTTGAAACGTGAAATTGGTTATAAAATCAAAACTATTAGGCGATCTTGTGGAAAAACTCAGATAGATATTTG
TGGTGATGAATCAGAGTTGACGATTCGTCAGCTAGCACGTATTGAAAATGGGCAAGCTTTAGCAACACTTCCTAAATTAT
TATTGATTGCGGATAAACTTGGAGTATCATTACAGAATATTGTGGATGTTAAGGTTATAGAGATTCCAAAAGGATTCCTA
AAACTCAAAGATGAGCTGATTCATTCTCAAACCTACGCTGATAAGGGAAGAATCGAACGAAAAGAAGCTATACTTGAGGA
AATATATGAAAACTATTATGAGAATTTGCCTGAGGAAGAGCAGTTAATTGTGGATGTGACACAAGCTCGTTTTGATATTT
ATGGTAGTTCAGATGTGACCTACGGTTTAGGGTTAGTGGAAGAATATTTCCAGCAGTTATTAAAAAAGAAATATTTTTCT
GTAAATGATTTGTTGATTATTGAATTGTATTTCTTTTGTTGTGCTATGGGATTAGAAGATAAAGAACATTTTGAGGAGTT
AGCTCAAAAAGTATTGCTATGTTCAGAATATGAAGATAAGGCTAGCCTAGTTCAAATGGAAAAAGTTCTTCTGAGCCTAT
TTATCCAAATTCAGACAGAAGATAGTCTGATATATATTCAAACATTTGAGAAAATTATTGCTAAAACAAGACATGTTTTT
TACCGACCTCATCTATTTTTGCTAAAGGCAAAATATGCTTTATTTGTAGACAAGAATATTTTAGAGGCAGAAAGTTTCTA
TGAAAAGGCGATTTCTCTAGCAGAATTGCTAGACGATCAGGTATTAGTTCAGAGAATTTTAGCAGAAAAACAGATAGATT
TCCCAACAACCTGA

Domains

Predicted by InterProScan.

• ComR tetratricopeptide (ComR_TPR) (76-289)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
comR	Streptococcus mutans UA159	36.667	100	0.37