Detailed information    

insolico Bioinformatically predicted

Overview

Name   treR   Type   Regulator
Locus tag   R8613_RS09190 Genome accession   NZ_AP026919
Coordinates   1770705..1771415 (+) Length   236 a.a.
NCBI ID   WP_000760673.1    Uniprot ID   A0A0H2URH4
Organism   Streptococcus pneumoniae strain PZ900700012     
Function   regulate expression of competence genes (predicted from homology)   
Competence regulation

Genomic Context

Location: 1765705..1776415
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  R8613_RS09175 (PC0012_17980) - 1766246..1766494 (-) 249 WP_000364990.1 YneF family protein -
  R8613_RS09180 (PC0012_17990) treC 1766750..1768375 (-) 1626 WP_000171201.1 alpha,alpha-phosphotrehalase -
  R8613_RS09185 (PC0012_18000) treP 1768553..1770520 (-) 1968 WP_000514357.1 PTS system trehalose-specific EIIBC component -
  R8613_RS09190 (PC0012_18010) treR 1770705..1771415 (+) 711 WP_000760673.1 trehalose operon repressor Regulator
  R8613_RS09195 - 1771612..1772750 (+) 1139 Protein_1828 transposase -
  R8613_RS09200 (PC0012_18040) - 1772825..1773751 (-) 927 WP_001291293.1 ATP-binding cassette domain-containing protein -
  R8613_RS09205 (PC0012_18050) amiE 1773762..1774829 (-) 1068 WP_000159554.1 ABC transporter ATP-binding protein Regulator
  R8613_RS09210 (PC0012_18060) amiD 1774838..1775764 (-) 927 WP_000103700.1 oligopeptide ABC transporter permease OppC Regulator

Sequence

Protein


Download         Length: 236 a.a.        Molecular weight: 27607.78 Da        Isoelectric Point: 8.9698

>NTDB_id=81983 R8613_RS09190 WP_000760673.1 1770705..1771415(+) (treR) [Streptococcus pneumoniae strain PZ900700012]
MKKYQQLFKQIQETIQNETYAVGDFLPSEHDLMEQYQVSRDTVRKALSLLQEEGLIKKIRGQGSQVVKEETVNFPVSNLT
SYQELVKELGLRSKTNVVSLDKIIIDKKSSLITGFPEFRMVWKVVRQRVVDDLVSVLDTDYLDMELIPNLTRQIAEQSIY
SYIENGLKLLIDYAQKEITIDHSSDRDKILMDIGKDPYVVSIKSKVYLQDGRQFQFTESRHKLEKFRFVDFAKRKK

Nucleotide


Download         Length: 711 bp        

>NTDB_id=81983 R8613_RS09190 WP_000760673.1 1770705..1771415(+) (treR) [Streptococcus pneumoniae strain PZ900700012]
ATGAAGAAATACCAACAATTATTTAAGCAAATCCAAGAAACCATTCAAAACGAGACTTACGCTGTCGGAGATTTCCTTCC
TAGCGAGCACGACCTTATGGAGCAATATCAAGTGAGTCGTGATACCGTCCGAAAGGCCCTGTCTCTCCTCCAAGAGGAAG
GATTGATCAAAAAGATAAGAGGGCAAGGTTCTCAAGTCGTCAAAGAAGAAACCGTCAATTTCCCTGTATCCAACCTAACC
AGCTACCAAGAACTAGTTAAAGAACTTGGACTGCGCTCTAAAACCAACGTGGTCAGTCTGGACAAGATTATTATTGATAA
AAAATCCTCGCTGATAACCGGTTTCCCAGAGTTTCGGATGGTTTGGAAGGTGGTCCGCCAGCGTGTGGTGGATGATCTGG
TATCCGTTCTGGATACAGACTATCTGGATATGGAACTAATTCCAAATCTCACTCGCCAAATTGCTGAGCAGTCTATCTAT
TCTTATATAGAAAATGGCCTCAAACTCCTTATTGATTATGCTCAGAAGGAAATCACCATTGACCACTCAAGCGACCGAGA
CAAGATTCTCATGGACATTGGCAAAGACCCTTATGTCGTTTCGATTAAATCAAAAGTCTATCTCCAAGACGGACGCCAAT
TTCAGTTTACCGAAAGTCGCCATAAGTTAGAAAAATTTAGATTTGTAGATTTTGCAAAACGCAAGAAATAA

Domains

Predicted by InterProScan.

Bacterial regulatory proteins, gntR family (GntR)

(3-66)

UTRA domain (UTRA)

(89-227)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A0H2URH4

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  treR Streptococcus mutans UA159

59.322

100

0.593

Multiple sequence alignment