Detailed information
Bioinformatically predicted
Overview
| Name | ssbA | Type | Machinery gene |
| Locus tag | QAY81_RS13830 | Genome accession | NZ_CP123068 |
| Coordinates | 2769804..2770232 (+) | Length | 142 a.a. |
| NCBI ID | WP_000934784.1 | Uniprot ID | - |
| Organism | Staphylococcus aureus strain SW-MSSA65 | ||
| Function | ssDNA binding (predicted from homology) DNA processing |
||
Genomic Context
Location: 2764804..2775232
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| QAY81_RS13760 (QAY81_13755) | - | 2764952..2765395 (+) | 444 | WP_000435360.1 | hypothetical protein | - |
| QAY81_RS13765 (QAY81_13760) | - | 2765410..2765550 (+) | 141 | WP_000939495.1 | hypothetical protein | - |
| QAY81_RS13770 (QAY81_13765) | - | 2765543..2765752 (-) | 210 | WP_000772137.1 | hypothetical protein | - |
| QAY81_RS13775 (QAY81_13770) | - | 2765809..2766000 (+) | 192 | WP_000389905.1 | hypothetical protein | - |
| QAY81_RS13780 (QAY81_13775) | - | 2766002..2766229 (-) | 228 | WP_000801108.1 | hypothetical protein | - |
| QAY81_RS13785 (QAY81_13780) | - | 2766290..2767039 (+) | 750 | WP_001148588.1 | phage antirepressor KilAC domain-containing protein | - |
| QAY81_RS13790 (QAY81_13785) | - | 2767056..2767250 (+) | 195 | WP_000388066.1 | hypothetical protein | - |
| QAY81_RS13795 (QAY81_13790) | - | 2767281..2767380 (+) | 100 | Protein_2677 | hypothetical protein | - |
| QAY81_RS13800 (QAY81_13795) | - | 2767529..2767852 (+) | 324 | WP_001120937.1 | DUF771 domain-containing protein | - |
| QAY81_RS13805 (QAY81_13800) | - | 2767849..2768010 (+) | 162 | WP_000048129.1 | DUF1270 family protein | - |
| QAY81_RS13810 (QAY81_13805) | - | 2768105..2768407 (+) | 303 | WP_000165369.1 | DUF2482 family protein | - |
| QAY81_RS13815 (QAY81_13810) | - | 2768412..2768672 (+) | 261 | WP_000291065.1 | DUF1108 family protein | - |
| QAY81_RS13820 (QAY81_13815) | - | 2768687..2769166 (+) | 480 | WP_000002518.1 | siphovirus Gp157 family protein | - |
| QAY81_RS13825 (QAY81_13820) | - | 2769166..2769804 (+) | 639 | WP_001043072.1 | ERF family protein | - |
| QAY81_RS13830 (QAY81_13825) | ssbA | 2769804..2770232 (+) | 429 | WP_000934784.1 | single-stranded DNA-binding protein | Machinery gene |
| QAY81_RS13835 (QAY81_13830) | - | 2770246..2770941 (+) | 696 | WP_411907760.1 | putative HNHc nuclease | - |
| QAY81_RS13840 (QAY81_13835) | - | 2770913..2771731 (+) | 819 | WP_000504972.1 | phage replisome organizer N-terminal domain-containing protein | - |
| QAY81_RS13845 (QAY81_13840) | - | 2771731..2772087 (+) | 357 | WP_001132243.1 | hypothetical protein | - |
| QAY81_RS13850 (QAY81_13845) | - | 2772084..2773325 (+) | 1242 | WP_001106159.1 | DnaB helicase C-terminal domain-containing protein | - |
| QAY81_RS13855 (QAY81_13850) | - | 2773322..2773537 (+) | 216 | WP_001024402.1 | hypothetical protein | - |
| QAY81_RS13860 (QAY81_13855) | - | 2773540..2773761 (+) | 222 | WP_001123681.1 | DUF3269 family protein | - |
| QAY81_RS13865 (QAY81_13860) | - | 2773772..2774176 (+) | 405 | WP_000049784.1 | DUF1064 domain-containing protein | - |
| QAY81_RS13870 (QAY81_13865) | - | 2774181..2774366 (+) | 186 | WP_001187240.1 | DUF3113 family protein | - |
| QAY81_RS13875 (QAY81_13870) | - | 2774367..2774522 (+) | 156 | WP_411907761.1 | hypothetical protein | - |
| QAY81_RS13880 (QAY81_13875) | - | 2774695..2774988 (+) | 294 | WP_411907762.1 | SA1788 family PVL leukocidin-associated protein | - |
Sequence
Protein
Download Length: 142 a.a. Molecular weight: 16035.56 Da Isoelectric Point: 5.8724
>NTDB_id=818109 QAY81_RS13830 WP_000934784.1 2769804..2770232(+) (ssbA) [Staphylococcus aureus strain SW-MSSA65]
MLNRTVLVGRLTKDPEYRTTPNGVSVTTFTIAVNRTFTNAQGEREADFINCVTFRKQAENVNNYLSKGSLAGVDGRLQSR
SYENKDGQRVFVTEVVADSVQFLEPKNNNQQPNNNYHQQRQTQTGNNPFDNTTAITDDDLPF
MLNRTVLVGRLTKDPEYRTTPNGVSVTTFTIAVNRTFTNAQGEREADFINCVTFRKQAENVNNYLSKGSLAGVDGRLQSR
SYENKDGQRVFVTEVVADSVQFLEPKNNNQQPNNNYHQQRQTQTGNNPFDNTTAITDDDLPF
Nucleotide
Download Length: 429 bp
>NTDB_id=818109 QAY81_RS13830 WP_000934784.1 2769804..2770232(+) (ssbA) [Staphylococcus aureus strain SW-MSSA65]
ATGTTAAACAGAACAGTATTAGTAGGACGCTTAACAAAAGATCCAGAATATAGAACAACGCCAAATGGTGTGAGTGTTAC
CACTTTCACTATCGCAGTTAACAGAACATTTACTAACGCTCAAGGAGAACGTGAGGCAGACTTTATTAACTGTGTAACTT
TTAGAAAACAAGCAGAAAATGTAAATAATTATTTATCCAAAGGGTCATTGGCTGGCGTTGATGGACGTTTACAATCACGC
AGTTATGAAAACAAAGACGGGCAACGTGTATTTGTCACAGAAGTAGTAGCGGACAGTGTTCAATTCTTAGAACCGAAGAA
TAACAACCAACAACCAAACAACAATTATCATCAACAAAGACAAACTCAAACTGGTAATAATCCTTTTGATAATACCACTG
CGATTACTGATGATGACTTACCGTTCTGA
ATGTTAAACAGAACAGTATTAGTAGGACGCTTAACAAAAGATCCAGAATATAGAACAACGCCAAATGGTGTGAGTGTTAC
CACTTTCACTATCGCAGTTAACAGAACATTTACTAACGCTCAAGGAGAACGTGAGGCAGACTTTATTAACTGTGTAACTT
TTAGAAAACAAGCAGAAAATGTAAATAATTATTTATCCAAAGGGTCATTGGCTGGCGTTGATGGACGTTTACAATCACGC
AGTTATGAAAACAAAGACGGGCAACGTGTATTTGTCACAGAAGTAGTAGCGGACAGTGTTCAATTCTTAGAACCGAAGAA
TAACAACCAACAACCAAACAACAATTATCATCAACAAAGACAAACTCAAACTGGTAATAATCCTTTTGATAATACCACTG
CGATTACTGATGATGACTTACCGTTCTGA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| ssbA | Bacillus subtilis subsp. subtilis str. 168 |
58.721 |
100 |
0.711 |
| ssb | Latilactobacillus sakei subsp. sakei 23K |
51.176 |
100 |
0.613 |
| ssbB | Bacillus subtilis subsp. subtilis str. 168 |
58.491 |
74.648 |
0.437 |
| ssbB | Streptococcus sobrinus strain NIDR 6715-7 |
42.657 |
100 |
0.43 |
| ssbA | Streptococcus mutans UA159 |
41.549 |
100 |
0.415 |
| ssbB/cilA | Streptococcus mitis NCTC 12261 |
40.845 |
100 |
0.408 |
| ssbB/cilA | Streptococcus pneumoniae TIGR4 |
40.845 |
100 |
0.408 |
| ssbB/cilA | Streptococcus pneumoniae Rx1 |
40.141 |
100 |
0.401 |
| ssbB/cilA | Streptococcus pneumoniae D39 |
40.141 |
100 |
0.401 |
| ssbB/cilA | Streptococcus pneumoniae R6 |
40.141 |
100 |
0.401 |
| ssbB/cilA | Streptococcus mitis SK321 |
40.141 |
100 |
0.401 |