Detailed information NTG0813374

Bioinformatically predicted

Overview

• Name: xcpW
• Type: Machinery gene
• Locus tag: MTS78_RS07855
• Genome accession: NZ_CP121598
• Coordinates: 1619348..1620049 (+)
• Length: 233 a.a.
• NCBI ID: WP_000594589.1
• Uniprot ID: A0A9P3CZ31
• Organism: Acinetobacter baumannii strain JAB77
• Function: pseudopilus assembly (predicted from homology) DNA binding and uptake

Genomic Context

Location: 1614348..1625049

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
MTS78_RS07820 (MTS78_07820)	kdsB	1614871..1615632 (+)	762	WP_000680697.1	3-deoxy-manno-octulosonate cytidylyltransferase	-
MTS78_RS07825 (MTS78_07825)	-	1615644..1616624 (+)	981	WP_001075411.1	DNA polymerase III subunit delta'	-
MTS78_RS07830 (MTS78_07830)	-	1616636..1616977 (+)	342	WP_001183024.1	PilZ domain-containing protein	-
MTS78_RS07835 (MTS78_07835)	-	1616995..1617768 (+)	774	WP_000497298.1	TatD family hydrolase	-
MTS78_RS07840 (MTS78_07840)	-	1617806..1618414 (+)	609	WP_000375838.1	TetR/AcrR family transcriptional regulator	-
MTS78_RS07845 (MTS78_07845)	-	1618424..1618978 (+)	555	WP_000841373.1	type II secretion system protein	-
MTS78_RS07850 (MTS78_07850)	xcpV	1618968..1619348 (+)	381	WP_000836911.1	type II secretion system minor pseudopilin GspI	Machinery gene
MTS78_RS07855 (MTS78_07855)	xcpW	1619348..1620049 (+)	702	WP_000594589.1	type II secretion system minor pseudopilin GspJ	Machinery gene
MTS78_RS07860 (MTS78_07860)	gspK	1620049..1621008 (+)	960	WP_000301476.1	type II secretion system minor pseudopilin GspK	-
MTS78_RS07865 (MTS78_07865)	-	1621239..1621835 (+)	597	WP_000908452.1	6-carboxytetrahydropterin synthase	-
MTS78_RS07870 (MTS78_07870)	ung	1621886..1622599 (+)	714	WP_001177528.1	uracil-DNA glycosylase	-
MTS78_RS07875 (MTS78_07875)	-	1622596..1623720 (+)	1125	WP_001983908.1	enoyl-CoA hydratase/isomerase family protein	-
MTS78_RS07880 (MTS78_07880)	tadA	1623727..1624230 (+)	504	WP_000033178.1	tRNA adenosine(34) deaminase TadA	-
MTS78_RS07885 (MTS78_07885)	-	1624300..1624743 (+)	444	WP_001246675.1	SRPBCC family protein	-

Sequence

Protein

• Length: 233 a.a.
• Molecular weight: 26639.58 Da
• Isoelectric Point: 9.3468

>NTDB_id=813374 MTS78_RS07855 WP_000594589.1 1619348..1620049(+) (xcpW) [Acinetobacter baumannii strain JAB77]
MIKNKYIHIRSIDSRLAARSSSARLTRASGFTLVELLVAIAIFAVLSLLGWKIFDYLLKVRDRNAEHEVHLFELQDAYQQ
ILRDTLQIIPLSANQGGQLHPALEIDNQILRFSKAGVTDPLKQGLSPFERIEYRYDADQKKLYRLKYTNLNTSNREQPLS
STLLSQVDQYQIMVLTPQEVTKWPEVNIDPTKPNELKKLPKGIKIQLTVAGVNYEWIYSLNQGDLSLSQEGNS

Nucleotide

• Length: 702 bp

>NTDB_id=813374 MTS78_RS07855 WP_000594589.1 1619348..1620049(+) (xcpW) [Acinetobacter baumannii strain JAB77]
ATGATAAAAAATAAATATATTCACATCCGAAGCATTGATTCTCGCCTTGCAGCACGATCGAGCAGTGCTCGATTAACTCG
CGCCTCAGGATTTACTTTGGTTGAATTGTTAGTCGCGATCGCTATCTTTGCGGTTTTATCTTTATTGGGGTGGAAAATTT
TCGATTACTTGCTCAAAGTTCGTGATCGTAATGCCGAACATGAAGTGCATTTATTTGAATTACAAGATGCTTATCAACAA
ATTCTTCGTGATACTTTGCAGATTATCCCTTTATCCGCAAACCAAGGTGGTCAACTTCATCCAGCTTTAGAAATCGATAA
TCAAATTTTACGTTTTAGCAAAGCAGGCGTAACGGATCCTTTAAAACAAGGCTTATCACCATTTGAACGAATTGAATATC
GTTATGATGCAGACCAAAAAAAATTATATCGTCTTAAATATACAAATTTGAATACTTCGAACAGAGAGCAACCTTTATCG
AGTACTTTGTTAAGTCAAGTCGACCAATATCAGATTATGGTTTTGACTCCGCAAGAAGTCACAAAATGGCCCGAGGTTAA
TATTGATCCAACGAAACCTAATGAGTTAAAAAAATTACCGAAAGGGATAAAAATCCAACTTACAGTCGCTGGTGTAAATT
ATGAGTGGATTTATAGCTTAAATCAGGGTGACTTATCGCTTTCGCAGGAAGGTAATTCATAA

Domains

Predicted by InterproScan.

• Prokaryotic N-terminal methylation motif (N_methyl) (27-49)

• Type II secretion system (T2SS), protein J (T2SSJ) (83-212)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
xcpW	Acinetobacter baumannii D1279779	99.571	100	0.996