Detailed information    

insolico Bioinformatically predicted

Overview


Name   rexA   Type   Machinery gene
Locus tag   F6I35_RS03710 Genome accession   NZ_CP136160
Coordinates   697603..701283 (+) Length   1226 a.a.
NCBI ID   WP_101750307.1    Uniprot ID   -
Organism   Streptococcus anginosus strain UMB8616     
Function   homologous recombination (predicted from homology)   
Homologous recombination

Genomic Context


Location: 692603..706283
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  F6I35_RS03700 (F6I35_0003700) - 693000..694214 (+) 1215 WP_101750295.1 ABC transporter permease -
  F6I35_RS03705 (F6I35_0003705) rexB 694334..697606 (+) 3273 WP_024051908.1 ATP-dependent nuclease subunit B Machinery gene
  F6I35_RS03710 (F6I35_0003710) rexA 697603..701283 (+) 3681 WP_101750307.1 helicase-exonuclease AddAB subunit AddA Machinery gene
  F6I35_RS03715 (F6I35_0003715) glgB 701803..703713 (+) 1911 WP_024051906.1 1,4-alpha-glucan branching protein GlgB -
  F6I35_RS03720 (F6I35_0003720) - 703717..704859 (+) 1143 WP_024051905.1 glucose-1-phosphate adenylyltransferase -
  F6I35_RS03725 (F6I35_0003725) glgD 704849..705988 (+) 1140 WP_024051904.1 glucose-1-phosphate adenylyltransferase subunit GlgD -

Sequence


Protein


Download         Length: 1226 a.a.        Molecular weight: 141287.94 Da        Isoelectric Point: 5.0891

>NTDB_id=812845 F6I35_RS03710 WP_101750307.1 697603..701283(+) (rexA) [Streptococcus anginosus strain UMB8616]
MRQIPFLSQEEIYALQDQEAQSDKAQKRTPEQIEAIYSSGQNILVSASAGSGKTFVMVQRIIDQILRGVRIDQLFISTFT
VKAASELKERLEKELSKVLKATDDEELKQHLAQQLADIPNADIGTMDSFTQKVLNKYGYLLELAPNFRILQNASEQLLLQ
NEVFEQVFEEFYQSDQAILFKKLVKNFTGQRKDLLGFREQIYKIYAFLQSTSSPIEYLEQDFLKAYAHADFQEEKAQLLA
QTKEALFDLEEFFQYHLANEAKEFPKAKYLENVQRVLDCLASLQGHSSEEAYLTTLNNIVEISHASNGKALTNSGRKEEL
KEIINAYNEKRKEKIQVLRDLADQFYRFEFQVTYHEEAKEILLVLQQFMKSFVTSYLQRKKEENAFEFADISHFAIQILE
EFPDVRHFYRTKYHEVMVDEYQDTNHTQERMLELLSNGGNRFMVGDIKQSIYRFRQADPQIFNEKFKTYQDDSQQGKLIV
LKENFRSHVEVLEATNDVFKRLMDEEVGEIDYNETHYLVAGNPAKKAPNPQYQTEFLIYDGTLETDNEENDKDVSSVSAG
EVALVIKEIIRLHNEENVPFEDMTLLTASRTRNDVILSEFAKYGIPVVSDGGEDNYLQSVEVMVMLDTLRTINNPFNDYA
LVALLKSPMFTFTEDELARLALQKKVTEATYVTHQENLYEKLKNSLSGNGQHPELITPPLLKKIQQFQEILLDWREFAKI
NSLYDLLWKIYQDRFYYDYVGALPNGAGRQANLYALTLRANDYEKMSFKGLSRFIGMIDKILETQNDLASVVVAAPKYAV
RLMTVHKSKGLEFKYVFLLNMDKVFNRKDSSSALIISRQNGVGIKYVADVVVDVADELAPNHVRLSIDTLPYEQNEREIH
LASISEQMRLLYVAMTRAERKLYLVGKGRQESLEKKTFPAPENGRLAASIRQTMTSFQDWIWALQTVFEKDDLAFSTQFV
TDSDLTSEKIGQLKLKERIVEENLAHNRQSEDIRRALDILENVDRLNTQYRAAIHLPSVRTPSQIKKFYEPVMDTDGVEI
MEKKTPDFIGKTSFELPDFAKKAPVIGAQIGSAVHELMQRIPLNQLPTIAILKKILAQVQAEETVKKKIDLQKIASFFET
ELGQLLLKQADKVYREAPFAMLKQDQASGQDFVVRGILDGYLLLADRIVLFDYKTDQYTNPSELVERYQAQLALYAEALR
RSYGIEKIEKYLVLLGGVQLQVVKVD

Nucleotide


Download         Length: 3681 bp        

>NTDB_id=812845 F6I35_RS03710 WP_101750307.1 697603..701283(+) (rexA) [Streptococcus anginosus strain UMB8616]
ATGAGACAGATTCCATTTTTGAGTCAGGAAGAAATCTATGCTTTGCAGGATCAAGAAGCACAGTCTGACAAAGCTCAAAA
ACGTACACCAGAGCAAATCGAAGCCATTTACTCCTCCGGTCAAAATATCCTTGTATCTGCTTCTGCAGGCTCAGGAAAAA
CCTTTGTTATGGTGCAGCGGATTATTGACCAAATTCTGCGGGGAGTTCGCATTGACCAGCTCTTCATTTCGACTTTTACC
GTTAAAGCAGCCAGTGAATTAAAAGAGCGCTTGGAGAAAGAGTTATCCAAGGTCTTGAAGGCAACAGATGATGAGGAGCT
CAAACAGCACTTGGCGCAGCAATTAGCCGATATTCCGAATGCCGACATTGGAACAATGGACTCTTTTACCCAAAAGGTCC
TCAATAAATATGGTTATCTCCTAGAATTGGCGCCAAATTTTCGCATTTTGCAAAATGCGAGTGAGCAGTTATTGCTACAA
AACGAAGTTTTTGAGCAAGTTTTTGAAGAATTCTATCAATCTGATCAGGCTATTTTATTTAAAAAATTAGTCAAAAACTT
TACCGGTCAAAGAAAAGATTTGCTTGGTTTTCGAGAGCAGATTTATAAGATTTATGCTTTTTTGCAATCCACCAGTAGCC
CAATCGAATACTTAGAACAAGATTTCTTGAAAGCTTACGCTCATGCGGACTTCCAAGAAGAAAAAGCGCAACTTTTAGCA
CAAACAAAAGAAGCCCTTTTTGACCTAGAAGAATTTTTCCAGTATCATTTGGCGAATGAAGCCAAGGAATTTCCCAAAGC
AAAATACCTTGAAAATGTGCAGCGTGTGCTTGATTGTCTGGCAAGTTTACAAGGGCATTCCTCTGAGGAAGCCTATCTCA
CAACGCTCAATAACATTGTAGAAATATCGCATGCCAGCAATGGAAAAGCCTTGACGAACAGCGGACGAAAAGAAGAATTA
AAAGAAATTATTAACGCCTATAACGAAAAACGCAAAGAAAAAATTCAAGTTTTACGAGATTTGGCAGATCAATTTTATCG
CTTTGAATTTCAAGTGACCTATCATGAGGAAGCCAAGGAAATCTTGCTTGTATTGCAGCAATTTATGAAATCGTTTGTGA
CAAGCTATCTACAACGGAAAAAAGAAGAAAATGCGTTTGAATTTGCAGATATCAGTCATTTTGCCATTCAGATTTTAGAA
GAATTTCCTGATGTGCGCCACTTTTATCGGACAAAATACCATGAAGTCATGGTGGATGAGTATCAAGATACCAACCACAC
GCAAGAGCGGATGCTAGAACTGTTATCAAATGGGGGTAATCGCTTTATGGTGGGGGATATTAAGCAGTCTATTTATCGTT
TTCGTCAGGCTGATCCGCAGATTTTTAATGAGAAATTTAAAACCTATCAAGACGATAGCCAGCAAGGGAAATTGATTGTT
TTGAAGGAAAATTTCCGCAGTCATGTGGAAGTCTTGGAAGCCACGAATGATGTTTTCAAACGTCTCATGGATGAGGAAGT
GGGAGAAATTGATTATAATGAAACGCATTATCTGGTAGCTGGAAATCCTGCTAAAAAAGCACCAAATCCACAATATCAGA
CGGAATTTCTCATTTATGACGGAACGCTTGAGACGGATAATGAGGAGAATGACAAGGATGTTTCTTCTGTTTCTGCAGGA
GAAGTAGCGCTGGTCATTAAGGAAATTATCCGTCTGCACAATGAGGAAAATGTCCCATTTGAAGATATGACATTGCTAAC
GGCTTCGCGGACGCGCAACGATGTGATTTTATCTGAGTTTGCCAAATACGGTATCCCAGTCGTTTCAGACGGTGGCGAGG
ATAATTATTTGCAATCTGTAGAAGTTATGGTGATGTTGGATACCCTGCGTACGATTAACAATCCGTTCAATGATTATGCT
TTAGTGGCGCTCTTAAAGTCACCAATGTTCACCTTTACTGAGGATGAATTGGCTCGTTTGGCCTTGCAAAAAAAGGTGAC
AGAAGCTACTTATGTTACTCATCAGGAAAATCTCTATGAGAAATTGAAAAATTCTCTGAGTGGGAACGGTCAACATCCCG
AACTCATCACACCTCCTCTTTTAAAGAAAATCCAGCAGTTTCAAGAAATACTGCTGGATTGGCGAGAGTTTGCAAAAATA
AATTCGCTCTATGATTTGCTTTGGAAAATTTATCAAGACCGCTTTTATTATGACTATGTAGGAGCCCTACCAAATGGAGC
AGGGCGTCAAGCGAATCTCTACGCTCTTACTTTGCGAGCAAATGACTACGAAAAGATGAGTTTTAAGGGCTTGTCGCGTT
TTATTGGGATGATTGATAAGATCTTAGAAACTCAAAATGATTTGGCGAGTGTCGTCGTTGCGGCTCCGAAGTATGCAGTC
CGCTTGATGACAGTTCATAAGAGCAAAGGTTTGGAATTTAAATATGTCTTTTTGCTTAATATGGATAAAGTCTTCAATCG
TAAGGATAGTAGTTCTGCTTTGATTATCAGTCGTCAAAATGGCGTCGGCATCAAGTATGTTGCGGACGTAGTGGTAGACG
TTGCTGATGAGCTGGCGCCTAATCATGTTCGTTTGTCTATCGATACTCTTCCTTATGAGCAAAATGAGCGTGAGATTCAT
TTGGCAAGTATTTCTGAGCAGATGCGTCTGCTCTATGTTGCTATGACGCGGGCAGAAAGAAAGCTGTATCTGGTTGGCAA
AGGTCGTCAAGAAAGCTTGGAGAAAAAGACCTTCCCTGCTCCTGAAAATGGTCGTTTAGCAGCCTCCATTAGGCAAACTA
TGACAAGTTTTCAAGACTGGATTTGGGCTTTACAGACAGTCTTTGAGAAAGACGATTTAGCTTTTTCAACACAATTTGTG
ACGGATAGTGACTTAACAAGTGAGAAAATAGGTCAGTTAAAGCTGAAGGAACGGATTGTCGAGGAGAACTTAGCGCACAA
TCGCCAGTCTGAGGATATTCGCAGGGCTTTGGATATTTTGGAAAATGTGGACAGGCTAAATACTCAGTATCGAGCAGCCA
TCCATTTGCCAAGTGTTCGGACACCGAGCCAAATCAAGAAATTTTATGAACCGGTCATGGATACAGACGGTGTTGAGATT
ATGGAGAAAAAAACTCCAGATTTTATTGGAAAAACTTCTTTTGAACTACCTGACTTTGCTAAAAAAGCCCCTGTTATAGG
AGCGCAAATCGGTAGTGCTGTCCATGAACTGATGCAGCGTATTCCTTTAAATCAACTGCCTACAATAGCTATTTTAAAGA
AAATATTGGCTCAGGTTCAGGCAGAAGAAACTGTCAAAAAGAAGATTGATTTGCAAAAGATAGCTAGTTTCTTTGAGACA
GAGCTTGGTCAACTACTCTTAAAGCAGGCAGATAAAGTTTATCGTGAAGCTCCATTTGCTATGTTAAAGCAAGATCAAGC
GAGCGGACAGGATTTTGTAGTCCGTGGAATTTTGGATGGTTATCTCCTACTGGCTGATCGTATCGTTCTCTTTGATTATA
AGACAGATCAATATACAAATCCAAGTGAATTAGTGGAGCGCTACCAGGCACAATTAGCACTTTACGCTGAAGCTCTTCGT
CGTTCGTATGGTATTGAAAAAATAGAAAAATATCTAGTGTTGTTGGGCGGAGTTCAACTTCAAGTAGTAAAAGTAGACTA
G


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  rexA Streptococcus pneumoniae R6

60.685

100

0.607