Detailed information
Bioinformatically predicted
Overview
| Name | pilZ | Type | Machinery gene |
| Locus tag | RPM47_RS18185 | Genome accession | NZ_CP135098 |
| Coordinates | 3927083..3927439 (+) | Length | 118 a.a. |
| NCBI ID | WP_003091119.1 | Uniprot ID | A0A0H2ZD30 |
| Organism | Pseudomonas aeruginosa strain Paer2090 | ||
| Function | assembly of type IV pilus (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 3922083..3932439
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| RPM47_RS18160 (RPM47_18160) | fabF | 3922295..3923539 (+) | 1245 | WP_003104132.1 | beta-ketoacyl-ACP synthase II | - |
| RPM47_RS18165 (RPM47_18165) | pabC | 3923539..3924354 (+) | 816 | WP_003110198.1 | aminodeoxychorismate lyase | - |
| RPM47_RS18170 (RPM47_18170) | mltG | 3924360..3925409 (+) | 1050 | WP_003104128.1 | endolytic transglycosylase MltG | - |
| RPM47_RS18175 (RPM47_18175) | tmk | 3925438..3926070 (+) | 633 | WP_003091125.1 | dTMP kinase | - |
| RPM47_RS18180 (RPM47_18180) | - | 3926063..3927049 (+) | 987 | WP_003110200.1 | DNA polymerase III subunit delta' | - |
| RPM47_RS18185 (RPM47_18185) | pilZ | 3927083..3927439 (+) | 357 | WP_003091119.1 | PilZ domain-containing protein | Machinery gene |
| RPM47_RS18190 (RPM47_18190) | - | 3927454..3928230 (+) | 777 | WP_003091117.1 | TatD family hydrolase | - |
| RPM47_RS18195 (RPM47_18195) | - | 3928456..3929589 (-) | 1134 | WP_003162178.1 | aminotransferase class V-fold PLP-dependent enzyme | - |
| RPM47_RS18200 (RPM47_18200) | - | 3929675..3930313 (+) | 639 | WP_003091114.1 | TetR/AcrR family transcriptional regulator | - |
| RPM47_RS18205 (RPM47_18205) | - | 3930463..3931359 (+) | 897 | WP_003162179.1 | radical SAM protein | - |
| RPM47_RS18210 (RPM47_18210) | - | 3931424..3932056 (+) | 633 | WP_003091112.1 | DUF4823 domain-containing protein | - |
Sequence
Protein
Download Length: 118 a.a. Molecular weight: 12903.98 Da Isoelectric Point: 9.9969
>NTDB_id=809550 RPM47_RS18185 WP_003091119.1 3927083..3927439(+) (pilZ) [Pseudomonas aeruginosa strain Paer2090]
MSLPPNLGPRNGILSLTIKDKSVLYAAYMPFIRNGGLFIPTNKNYKLGDEVFMLLNLMEEPEKIPVAGKVVWITPKGAQG
NRAAGIGVQFNDGDNTARNKIETYLAGALKSDRPTHTM
MSLPPNLGPRNGILSLTIKDKSVLYAAYMPFIRNGGLFIPTNKNYKLGDEVFMLLNLMEEPEKIPVAGKVVWITPKGAQG
NRAAGIGVQFNDGDNTARNKIETYLAGALKSDRPTHTM
Nucleotide
Download Length: 357 bp
>NTDB_id=809550 RPM47_RS18185 WP_003091119.1 3927083..3927439(+) (pilZ) [Pseudomonas aeruginosa strain Paer2090]
ATGAGTTTGCCACCCAATCTGGGGCCGCGTAACGGCATCCTGTCCTTGACCATCAAGGACAAGTCCGTGCTTTACGCCGC
CTACATGCCGTTCATCAGGAACGGCGGGCTGTTCATTCCCACCAACAAGAACTACAAGCTTGGCGACGAGGTCTTCATGC
TGCTCAACCTGATGGAAGAGCCGGAGAAGATCCCGGTGGCCGGCAAGGTCGTCTGGATCACCCCGAAGGGCGCCCAGGGC
AACCGTGCGGCGGGCATCGGCGTGCAGTTCAACGACGGTGACAACACCGCCCGCAACAAGATCGAAACCTACCTGGCCGG
GGCGCTGAAGTCGGACCGGCCGACCCACACGATGTAA
ATGAGTTTGCCACCCAATCTGGGGCCGCGTAACGGCATCCTGTCCTTGACCATCAAGGACAAGTCCGTGCTTTACGCCGC
CTACATGCCGTTCATCAGGAACGGCGGGCTGTTCATTCCCACCAACAAGAACTACAAGCTTGGCGACGAGGTCTTCATGC
TGCTCAACCTGATGGAAGAGCCGGAGAAGATCCCGGTGGCCGGCAAGGTCGTCTGGATCACCCCGAAGGGCGCCCAGGGC
AACCGTGCGGCGGGCATCGGCGTGCAGTTCAACGACGGTGACAACACCGCCCGCAACAAGATCGAAACCTACCTGGCCGG
GGCGCTGAAGTCGGACCGGCCGACCCACACGATGTAA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| pilZ | Legionella pneumophila str. Paris |
49.074 |
91.525 |
0.449 |
| pilZ | Legionella pneumophila strain ERS1305867 |
49.074 |
91.525 |
0.449 |