Detailed information    

insolico Bioinformatically predicted

Overview

Name   rok   Type   Regulator
Locus tag   P5661_RS08380 Genome accession   NZ_CP120600
Coordinates   1562559..1563143 (+) Length   194 a.a.
NCBI ID   WP_014113628.1    Uniprot ID   A0A0D1L215
Organism   Bacillus subtilis strain PRO112     
Function   repression of comK (predicted from homology)   
Competence regulation

Genomic Context

Location: 1557559..1568143
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  P5661_RS08350 (P5661_08350) dapD 1557746..1558456 (+) 711 WP_003218680.1 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-acetyltransferase -
  P5661_RS08355 (P5661_08355) dapI 1558526..1559650 (+) 1125 WP_277709566.1 N-acetyldiaminopimelate deacetylase -
  P5661_RS08360 (P5661_08360) ykuS 1559712..1559957 (+) 246 WP_003232382.1 YkuS family protein -
  P5661_RS08365 (P5661_08365) mscT 1559994..1560797 (-) 804 WP_003244994.1 small-conductance mechanosensitive channel protein MscT -
  P5661_RS08370 (P5661_08370) ahpA 1561034..1561576 (+) 543 WP_003245371.1 biofilm-specific peroxidase AhpA -
  P5661_RS08375 (P5661_08375) ykuV 1561647..1562093 (+) 447 WP_032725606.1 thiol-disulfide oxidoreductase YkuV -
  P5661_RS08380 (P5661_08380) rok 1562559..1563143 (+) 585 WP_014113628.1 transcriptional regulator Rok Regulator
  P5661_RS08385 (P5661_08385) cse15 1563184..1564149 (-) 966 WP_277709568.1 spore protein Cse15 -
  P5661_RS08390 (P5661_08390) mobA 1564286..1564885 (+) 600 WP_277709569.1 molybdenum cofactor guanylyltransferase -
  P5661_RS08395 (P5661_08395) moeB 1564936..1565955 (+) 1020 WP_003232375.1 molybdopterin-synthase adenylyltransferase MoeB -
  P5661_RS08400 (P5661_08400) glp 1565973..1567265 (+) 1293 WP_049139877.1 gephyrin-like molybdotransferase Glp -
  P5661_RS08405 (P5661_08405) mobB 1567226..1567747 (+) 522 WP_049139878.1 molybdopterin-guanine dinucleotide biosynthesis protein B -

Sequence

Protein


Download         Length: 194 a.a.        Molecular weight: 22127.12 Da        Isoelectric Point: 9.7036

>NTDB_id=806568 P5661_RS08380 WP_014113628.1 1562559..1563143(+) (rok) [Bacillus subtilis strain PRO112]
MFNEREALRLRLEQLNEAEVKVIREYQIERDKIYAKLRELDRNGSPSEIKKDFRSEKKPDSLPVLAELAAQEIRSYQPQS
QQQSVQPQLQSISSLPAGIPDGTTRRRRGTARPGSKAAKLREAAIKTLKRHNAAIKSSELQKEIEKESGLEIPNMTTFMQ
SLIKMYPEVKKPYRGQYILEGEIESAESAESANE

Nucleotide


Download         Length: 585 bp        

>NTDB_id=806568 P5661_RS08380 WP_014113628.1 1562559..1563143(+) (rok) [Bacillus subtilis strain PRO112]
ATGTTTAATGAAAGAGAAGCTTTGCGCTTGCGGTTAGAACAATTAAATGAAGCTGAAGTGAAAGTCATTCGTGAATATCA
AATTGAACGTGATAAAATATACGCAAAATTAAGAGAGCTGGACAGAAATGGAAGCCCTTCCGAAATCAAAAAGGATTTCC
GTTCTGAAAAAAAACCTGACTCTCTGCCGGTTCTCGCTGAGCTTGCGGCTCAGGAAATCAGAAGCTATCAGCCGCAATCA
CAGCAGCAGTCTGTCCAGCCTCAGCTTCAATCTATTTCCTCTCTTCCTGCCGGTATACCAGACGGAACAACACGAAGAAG
AAGAGGAACGGCAAGACCGGGATCAAAAGCAGCTAAGCTGCGTGAAGCTGCTATTAAAACATTAAAACGCCACAACGCGG
CGATTAAGAGCTCCGAGCTTCAAAAAGAGATTGAAAAAGAAAGCGGTCTTGAAATCCCTAATATGACAACGTTTATGCAA
AGCTTAATTAAAATGTACCCGGAAGTGAAAAAACCATATCGCGGGCAGTACATTTTAGAGGGTGAAATCGAATCTGCAGA
ATCAGCTGAATCAGCTAATGAATAA

Domains


No domain identified.



Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A0D1L215

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  rok Bacillus subtilis subsp. subtilis str. 168

100

97.423

0.974