Detailed information NTG0805883

Bioinformatically predicted

Overview

• Name: pilU
• Type: Machinery gene
• Locus tag: RKQ58_RS14370
• Genome accession: NZ_CP134579
• Coordinates: 2786564..2787682 (+)
• Length: 372 a.a.
• NCBI ID: WP_005135736.1
• Uniprot ID: -
• Organism: Acinetobacter baumannii strain XH1034
• Function: mediate the depolymerization of the type IV pilus (predicted from homology) DNA binding and uptake

Genomic Context

Location: 2781564..2792682

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
RKQ58_RS14360 (RKQ58_14355)	-	2784680..2785372 (-)	693	WP_001108509.1	YggS family pyridoxal phosphate-dependent enzyme	-
RKQ58_RS14365 (RKQ58_14360)	pilT	2785499..2786536 (+)	1038	WP_000355489.1	type IV pilus twitching motility protein PilT	Machinery gene
RKQ58_RS14370 (RKQ58_14365)	pilU	2786564..2787682 (+)	1119	WP_005135736.1	PilT/PilU family type 4a pilus ATPase	Machinery gene
RKQ58_RS14375 (RKQ58_14370)	fur	2787752..2788189 (-)	438	WP_001122847.1	ferric iron uptake transcriptional regulator	-
RKQ58_RS14380 (RKQ58_14375)	-	2788301..2788699 (+)	399	WP_001170994.1	outer membrane protein assembly factor BamE	-
RKQ58_RS14385 (RKQ58_14380)	-	2788754..2789077 (-)	324	WP_000442590.1	RnfH family protein	-
RKQ58_RS14390 (RKQ58_14385)	-	2789077..2790144 (-)	1068	WP_004748097.1	hypothetical protein	-
RKQ58_RS14395 (RKQ58_14390)	-	2790297..2790752 (-)	456	WP_000782976.1	bacteriohemerythrin	-
RKQ58_RS14400 (RKQ58_14395)	-	2791005..2791853 (-)	849	WP_000336554.1	class II glutamine amidotransferase	-

Sequence

Protein

• Length: 372 a.a.
• Molecular weight: 41890.10 Da
• Isoelectric Point: 6.8288

>NTDB_id=805883 RKQ58_RS14370 WP_005135736.1 2786564..2787682(+) (pilU) [Acinetobacter baumannii strain XH1034]
MDFNDLLNLMVEKKSSDLFITDGVAPSMKINGQIVPISKNSLSGEVIGQLLHSIMSEKQRKEFADTRECNFAIMNREKTA
RFRVSAFQQRDMPGMVLRRIETKIPSIDDLQLPPVLKDLSMTKRGIIIFVGATGTGKSTSLASMISHRNHNSKGHIITIE
DPIEFIHEHAGCIITQREVGIDTDSFEIALKNTLRQAPDVILIGEIRSREVMDYAIGFAETGHLVLATMHANNANQALDR
IIHFFESNRHSQLYMDLSLNLKAMIAQQLIPTPDGNSRRAAIEILINSPLISDYIRKGEIHEIKDLMKRSRELGMQTFDQ
ALFDLYKAGQITYKDALKHADSPNDLRLTIKLADEGPDQLSDGKQHLTFDRQ

Nucleotide

• Length: 1119 bp

>NTDB_id=805883 RKQ58_RS14370 WP_005135736.1 2786564..2787682(+) (pilU) [Acinetobacter baumannii strain XH1034]
ATGGATTTTAATGACCTACTCAACCTGATGGTTGAAAAGAAATCTTCCGATCTCTTTATTACAGATGGCGTTGCGCCCTC
TATGAAGATTAACGGGCAAATTGTTCCAATTTCAAAAAACAGCCTTTCTGGGGAAGTAATTGGTCAACTGTTACATTCCA
TTATGAGTGAAAAACAACGCAAAGAATTTGCAGACACTCGTGAATGTAACTTTGCCATTATGAACCGTGAAAAAACGGCG
CGTTTTCGTGTCAGTGCTTTTCAGCAGCGCGACATGCCAGGCATGGTACTACGTCGTATTGAAACCAAGATTCCTTCAAT
TGATGACTTGCAGTTACCGCCTGTACTTAAAGATTTATCGATGACCAAACGTGGCATTATTATTTTCGTAGGTGCGACAG
GTACAGGTAAATCTACTTCATTGGCTTCAATGATCAGCCATCGTAACCATAACTCTAAGGGCCATATCATTACCATTGAA
GACCCGATTGAGTTTATTCACGAACATGCAGGTTGCATCATTACTCAGCGTGAAGTCGGGATCGATACCGACTCATTTGA
AATTGCCTTGAAAAATACACTACGACAAGCGCCGGATGTGATCTTAATTGGTGAGATCCGTTCTCGTGAAGTCATGGACT
ACGCGATTGGCTTTGCTGAAACAGGCCATCTTGTATTAGCTACCATGCACGCCAACAACGCCAACCAAGCGCTCGACCGT
ATTATTCACTTTTTTGAAAGTAATCGTCATAGTCAGCTTTACATGGACTTGTCACTTAACTTAAAGGCAATGATTGCGCA
GCAGCTCATTCCAACACCAGATGGTAATTCACGCCGTGCAGCAATTGAGATTTTAATTAACTCACCATTAATTTCAGACT
ACATCCGTAAAGGTGAAATTCATGAAATTAAGGATTTGATGAAACGCTCACGTGAACTTGGTATGCAGACCTTTGACCAA
GCTTTATTTGATTTATATAAAGCTGGTCAAATTACCTACAAAGATGCACTTAAACATGCTGACTCACCGAACGATTTACG
TTTAACCATTAAACTTGCAGATGAAGGTCCTGATCAATTATCAGACGGAAAACAGCATTTAACTTTTGACCGCCAGTAA

Domains

Predicted by InterProScan.

• Type II/IV secretion system protein (T2SSE) (34-270)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
pilU	Acinetobacter baylyi ADP1	75.397	100	0.766
pilU	Pseudomonas stutzeri DSM 10701	68.75	98.925	0.68
pilU	Vibrio cholerae strain A1552	53.243	99.462	0.53
pilT	Deinococcus radiodurans R1 = ATCC 13939 = DSM 20539	41.908	93.011	0.39