Detailed information NTG0803784

Bioinformatically predicted

Overview

• Name: ceuB
• Type: Machinery gene
• Locus tag: P3U46_RS11005
• Genome accession: NZ_CP120148
• Coordinates: 2188053..2189024 (-)
• Length: 323 a.a.
• NCBI ID: WP_025905417.1
• Uniprot ID: A0AAJ4SJJ8
• Organism: Mammaliicoccus sciuri strain Dog029_2
• Function: DNA uptake (predicted from homology) DNA binding and uptake

Related MGE

Note: This gene co-localizes with putative mobile genetic elements (MGEs) in the genome predicted by VRprofile2, as detailed below.

Gene-MGE association summary

MGE type	MGE coordinates	Gene coordinates	Relative position	Distance (bp)
Prophage	2189716..2199218	2188053..2189024	flank	692

Gene organization within MGE regions

Location: 2188053..2199218

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
P3U46_RS11005 (P3U46_11005)	ceuB	2188053..2189024 (-)	972	WP_025905417.1	ABC transporter permease	Machinery gene
P3U46_RS11010 (P3U46_11010)	-	2189150..2189566 (-)	417	WP_058612032.1	FixH family protein	-
P3U46_RS11015 (P3U46_11015)	nrdF	2189716..2190687 (-)	972	WP_048539937.1	class 1b ribonucleoside-diphosphate reductase subunit beta	-
P3U46_RS11020 (P3U46_11020)	nrdE	2190716..2192821 (-)	2106	WP_058612033.1	class 1b ribonucleoside-diphosphate reductase subunit alpha	-
P3U46_RS11025 (P3U46_11025)	nrdI	2192784..2193182 (-)	399	WP_025905413.1	class Ib ribonucleoside-diphosphate reductase assembly flavoprotein NrdI	-
P3U46_RS11030 (P3U46_11030)	-	2193557..2194441 (+)	885	WP_048539939.1	DMT family transporter	-
P3U46_RS11035 (P3U46_11035)	queF	2194441..2194941 (+)	501	WP_048539940.1	preQ(1) synthase	-
P3U46_RS11040 (P3U46_11040)	-	2195235..2196749 (+)	1515	WP_048539941.1	peptide MFS transporter	-
P3U46_RS11045 (P3U46_11045)	-	2197095..2198597 (+)	1503	WP_048539942.1	peptide MFS transporter	-
P3U46_RS11050 (P3U46_11050)	-	2198637..2199218 (-)	582	WP_048539943.1	5' nucleotidase, NT5C type	-

Sequence

Protein

• Length: 323 a.a.
• Molecular weight: 35476.97 Da
• Isoelectric Point: 10.7243

>NTDB_id=803784 P3U46_RS11005 WP_025905417.1 2188053..2189024(-) (ceuB) [Mammaliicoccus sciuri strain Dog029_2]
MGKFLMRLDVLIILLVIATFFSIFIGVSEVKPLHILNLTDEQKNILVSSRIPRTVSIIISGSSLAICGLIMQQLTRNKFV
SPTTAGTMDWARLGILISLIAFPEANILLKLLFATLLSLFGTMLFMQILRRIQFKDVIFIPLVGIMLGNIVSSFSSFVAL
RTNAVQSIGNFMQGNFSIITSGRYEILYISIPLLILAFIFANQFTIAGMGKDFSVNLGLNYQKVVNIGLIIASIITALVV
VTVGMMPFLGLIIPNLVSIFRGDHLKNALPHTAVFGALFVMICDVIGRLIIFPYEITIGLTIGVIGSFIFIVLLMKGRSR
NAQ

Nucleotide

• Length: 972 bp

>NTDB_id=803784 P3U46_RS11005 WP_025905417.1 2188053..2189024(-) (ceuB) [Mammaliicoccus sciuri strain Dog029_2]
ATGGGAAAGTTTTTAATGCGTTTAGATGTTTTGATTATTTTATTAGTAATTGCAACGTTCTTCTCTATATTTATAGGTGT
TTCAGAAGTAAAACCATTACATATATTAAATTTAACAGACGAACAGAAGAACATTTTAGTATCAAGTAGAATTCCAAGAA
CAGTCAGTATTATTATTTCAGGTAGCTCGTTAGCTATTTGTGGACTGATTATGCAACAGCTTACAAGAAATAAATTCGTT
TCTCCAACAACTGCAGGGACAATGGATTGGGCCAGATTAGGTATATTAATTTCTCTTATCGCTTTTCCAGAAGCCAACAT
ACTACTTAAATTATTATTTGCTACATTATTAAGTTTATTTGGAACAATGCTATTCATGCAAATTCTCCGTAGAATTCAAT
TTAAAGATGTTATTTTTATACCATTAGTTGGTATTATGCTCGGAAACATAGTGTCAAGTTTTTCATCTTTTGTTGCATTA
CGTACAAATGCTGTACAAAGTATTGGTAATTTTATGCAAGGTAATTTCTCAATTATTACAAGCGGTAGATATGAAATTCT
TTATATTAGTATTCCGTTATTGATTTTAGCATTTATATTTGCGAATCAATTTACGATTGCTGGTATGGGTAAAGATTTTA
GTGTGAATTTAGGACTTAATTATCAAAAAGTCGTCAATATCGGACTGATTATTGCCTCAATCATTACGGCACTTGTTGTT
GTAACAGTTGGTATGATGCCATTCTTAGGTTTAATTATTCCTAACTTAGTTTCAATATTCAGAGGAGATCATTTAAAAAA
TGCATTGCCGCATACAGCTGTATTTGGTGCATTGTTTGTTATGATTTGTGATGTAATAGGTCGATTAATTATATTCCCTT
ATGAAATTACAATTGGTTTAACAATTGGTGTGATTGGTAGTTTCATATTTATAGTATTGCTGATGAAAGGACGTTCAAGA
AATGCTCAATAA

Domains

Predicted by InterproScan.

• FecCD transport family (FecCD) (14-316)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
ceuB	Campylobacter jejuni subsp. jejuni 81-176	51.104	98.142	0.502