Detailed information NTG0799587

Bioinformatically predicted

Overview

• Name: xerS
• Type: Machinery gene
• Locus tag: RDV58_RS06340
• Genome accession: NZ_CP133475
• Coordinates: 1252711..1253781 (+)
• Length: 356 a.a.
• NCBI ID: WP_002279939.1
• Uniprot ID: -
• Organism: Streptococcus mutans strain LMG 14558
• Function: homologous recombination (predicted from homology) Homologous recombination

Genomic Context

Location: 1247711..1258781

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
RDV58_RS06315 (RDV58_06305)	-	1248230..1249063 (+)	834	WP_002279941.1	glycosyltransferase family 8 protein	-
RDV58_RS06320 (RDV58_06310)	-	1249196..1249888 (+)	693	WP_002262300.1	response regulator transcription factor	-
RDV58_RS06325 (RDV58_06315)	-	1249888..1250766 (+)	879	WP_002265019.1	sensor histidine kinase KdpD	-
RDV58_RS06330 (RDV58_06320)	-	1250814..1251557 (-)	744	WP_002279940.1	ABC transporter permease	-
RDV58_RS06335 (RDV58_06325)	-	1251578..1252486 (-)	909	WP_002265017.1	ABC transporter ATP-binding protein	-
RDV58_RS06340 (RDV58_06330)	xerS	1252711..1253781 (+)	1071	WP_002279939.1	tyrosine recombinase XerS	Machinery gene
RDV58_RS06345 (RDV58_06335)	-	1254073..1254209 (+)	137	Protein_1201	IS3 family transposase	-
RDV58_RS06350 (RDV58_06340)	-	1254277..1255668 (-)	1392	WP_002280284.1	oxaloacetate decarboxylase subunit alpha	-
RDV58_RS06355 (RDV58_06345)	citX	1255681..1256217 (-)	537	WP_002270837.1	citrate lyase holo-[acyl-carrier protein] synthase	-
RDV58_RS06360 (RDV58_06350)	citF	1256210..1257745 (-)	1536	WP_002280283.1	citrate lyase subunit alpha	-
RDV58_RS06365 (RDV58_06355)	citE	1257732..1258634 (-)	903	WP_002280282.1	citrate (pro-3S)-lyase subunit beta	-

Sequence

Protein

• Length: 356 a.a.
• Molecular weight: 41606.90 Da
• Isoelectric Point: 9.6657

>NTDB_id=799587 RDV58_RS06340 WP_002279939.1 1252711..1253781(+) (xerS) [Streptococcus mutans strain LMG 14558]
MRRELLLEKIDELKELMPWYVLEYYQSKLTIPYSFTTLYEYLKEYRRFFEWLINSGVSDANKLADIPLETLEHLSKKDME
SFILYLRERTLLNTKNKRQGVSQTTINRTLSALSSLYKYLTEEVENADGEPYFYRNVMKKVSTKKKKETLAARAENIKQK
LFLGNETMEFLEYVDCEYEHKLSKRALSSFRKNKERDLAIIALLLASGVRLSEAVNLDLKDVNLNMMIIEVTRKGGKHDS
VNVAGFAKPYLENYITIRRGRYKAEKTDLAFFLSEYRGVPNRMDASSIEKMVAKYSQDFKIRVTPHKLRHTLATRLYDAT
KSQVLVSHQLGHASTQVTDLYTHIVNDEQKNALDKL

Nucleotide

• Length: 1071 bp

>NTDB_id=799587 RDV58_RS06340 WP_002279939.1 1252711..1253781(+) (xerS) [Streptococcus mutans strain LMG 14558]
ATGAGACGTGAACTCTTACTTGAAAAAATTGATGAACTTAAGGAACTTATGCCTTGGTATGTGCTAGAGTATTATCAATC
TAAATTGACAATTCCTTATAGTTTTACGACCTTATACGAATATTTAAAAGAATATCGGCGTTTCTTTGAATGGTTAATCA
ATTCTGGCGTTTCTGATGCGAATAAACTTGCCGATATTCCGCTGGAAACTTTGGAGCATCTTAGTAAAAAAGATATGGAA
TCCTTTATTCTTTATTTACGAGAACGAACTCTTTTAAACACTAAAAACAAACGTCAAGGTGTTTCTCAGACAACGATAAA
CCGCACACTTTCAGCCTTATCAAGCCTTTATAAATACTTGACTGAGGAAGTTGAAAATGCTGATGGTGAACCTTATTTTT
ATCGAAATGTCATGAAAAAGGTATCAACTAAAAAGAAAAAGGAAACATTGGCCGCACGAGCTGAGAATATTAAACAAAAG
CTCTTTTTAGGCAATGAAACAATGGAATTTTTAGAATATGTGGATTGTGAATATGAACACAAACTTTCTAAACGCGCTCT
TTCCTCTTTTCGAAAAAATAAAGAAAGAGATTTGGCAATTATTGCTTTGCTGCTAGCATCTGGAGTTCGTCTTTCAGAGG
CTGTTAACCTTGATCTTAAGGATGTTAATCTCAATATGATGATTATTGAAGTTACCCGTAAGGGCGGCAAACACGATTCG
GTCAATGTCGCTGGTTTCGCTAAACCTTATTTAGAAAACTACATTACTATCAGACGGGGGCGCTACAAGGCTGAAAAGAC
TGATCTAGCTTTCTTTTTATCCGAATATCGTGGTGTTCCTAATCGCATGGATGCTTCTTCTATTGAAAAAATGGTTGCTA
AATATTCGCAAGATTTCAAAATCCGCGTCACTCCCCACAAACTAAGACACACGCTTGCAACTAGATTATACGATGCTACC
AAATCACAAGTTTTGGTCAGTCATCAATTAGGTCATGCTTCTACTCAAGTAACAGACCTTTATACTCATATCGTTAATGA
TGAACAAAAAAATGCTTTAGATAAATTATAA

Domains

Predicted by InterProScan.

• Phage integrase, N-terminal SAM-like domain (Phage_int_SAM_4) (33-122)

• Phage integrase family (Phage_integrase) (191-344)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
xerS	Streptococcus pneumoniae R6	82.584	100	0.826