Detailed information    

insolico Bioinformatically predicted

Overview


Name   vraS   Type   Regulator
Locus tag   PYH63_RS05095 Genome accession   NZ_CP118788
Coordinates   1074142..1075185 (+) Length   347 a.a.
NCBI ID   WP_019166463.1    Uniprot ID   A0A2A4GVQ0
Organism   Staphylococcus delphini strain 7070     
Function   repress expression of competence genes (predicted from homology)   
Competence regulation

Genomic Context


Location: 1069142..1080185
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  PYH63_RS05070 (PYH63_05025) - 1069282..1070004 (+) 723 WP_096597671.1 glutamine amidotransferase -
  PYH63_RS05075 (PYH63_05030) - 1071088..1072086 (-) 999 WP_262611975.1 aromatic acid exporter family protein -
  PYH63_RS05080 (PYH63_05035) map 1072183..1072944 (+) 762 WP_019166460.1 type I methionyl aminopeptidase -
  PYH63_RS05085 (PYH63_05040) - 1073042..1073431 (+) 390 WP_262611976.1 hypothetical protein -
  PYH63_RS05090 (PYH63_05045) liaF 1073444..1074145 (+) 702 WP_096597675.1 cell wall-active antibiotics response protein LiaF -
  PYH63_RS05095 (PYH63_05050) vraS 1074142..1075185 (+) 1044 WP_019166463.1 sensor histidine kinase Regulator
  PYH63_RS05100 (PYH63_05055) vraR 1075175..1075804 (+) 630 WP_014613482.1 response regulator transcription factor Regulator
  PYH63_RS05105 (PYH63_05060) - 1076438..1077019 (-) 582 WP_096597677.1 carbonic anhydrase -
  PYH63_RS05110 (PYH63_05065) - 1077052..1078398 (-) 1347 WP_262611979.1 YhjD/YihY/BrkB family envelope integrity protein -
  PYH63_RS05115 (PYH63_05070) - 1078614..1078901 (-) 288 WP_014613485.1 YtxH domain-containing protein -
  PYH63_RS05120 (PYH63_05075) - 1078909..1079367 (-) 459 WP_262611980.1 low molecular weight protein-tyrosine-phosphatase -
  PYH63_RS05125 (PYH63_05080) - 1079501..1079704 (+) 204 WP_019169369.1 DUF1128 family protein -

Sequence


Protein


Download         Length: 347 a.a.        Molecular weight: 39911.18 Da        Isoelectric Point: 5.0397

>NTDB_id=795247 PYH63_RS05095 WP_019166463.1 1074142..1075185(+) (vraS) [Staphylococcus delphini strain 7070]
MNHYVRAIGSMLILVYSMLTAFFFIDKVFTNIIFFQGMFYTQILGIPVFIFLNLVVIFLCIIVGSVLAYKINQQNDWVKQ
QIVRAFEGETVGINDQQLELYNETIELYQALVPLNQELHKMRIKTQNLTNETYNLNDLKVKKIIEDERQRLARELHDSVS
QQLFAASMMLSAIKETDLAPPLDQQIPTLEKMVQDSQLEMRALLLHLRPIGLKDKSLGEGIKSLVTDLQRKVPIKVVQEI
DEFEVPKGIEDHLFRITQEAISNTLRHAEGTQVTVELLNRNDYLLLRIQDDGIGFNVDDKLEQSYGLKNMRERAIEIGAT
FHIVSLPDAGTRIEVKAPLEKEEQHDN

Nucleotide


Download         Length: 1044 bp        

>NTDB_id=795247 PYH63_RS05095 WP_019166463.1 1074142..1075185(+) (vraS) [Staphylococcus delphini strain 7070]
ATGAATCACTACGTCCGAGCGATAGGTTCGATGCTCATTCTCGTATATAGTATGCTCACCGCGTTTTTCTTTATCGATAA
AGTGTTTACCAATATTATTTTCTTTCAAGGCATGTTTTATACACAAATTTTAGGGATTCCTGTTTTTATCTTTTTAAATT
TAGTCGTCATTTTTTTATGTATTATCGTGGGCAGTGTGTTAGCTTATAAAATCAATCAACAAAATGATTGGGTGAAGCAA
CAAATCGTTCGTGCTTTCGAAGGCGAAACAGTGGGAATCAATGATCAACAACTTGAGCTGTATAATGAAACGATTGAATT
GTACCAAGCGCTCGTCCCATTGAATCAAGAACTGCATAAAATGCGGATTAAAACACAAAATTTAACGAATGAAACGTATA
ATTTAAATGATTTGAAGGTGAAAAAGATTATAGAAGATGAACGGCAGCGTTTAGCACGAGAATTGCATGATAGTGTGTCG
CAACAACTTTTCGCGGCAAGTATGATGTTGTCTGCAATCAAGGAAACAGATTTAGCTCCACCGTTAGACCAACAAATTCC
AACGTTAGAAAAAATGGTGCAAGACTCACAACTTGAAATGCGTGCACTGTTACTTCATTTAAGACCTATAGGATTGAAGG
ATAAATCGTTAGGTGAGGGGATAAAATCGCTCGTGACGGATTTACAACGCAAAGTGCCCATTAAAGTCGTGCAAGAAATT
GATGAGTTTGAAGTCCCTAAAGGTATTGAGGATCACCTTTTTAGGATTACCCAAGAAGCGATTTCCAATACGTTACGACA
TGCTGAGGGAACGCAAGTAACAGTAGAATTACTTAACCGCAATGATTATTTATTGTTGCGTATACAAGATGACGGCATTG
GATTTAATGTCGATGATAAATTAGAACAAAGTTATGGATTAAAAAATATGCGTGAACGTGCAATAGAGATTGGTGCCACG
TTTCATATCGTCTCATTACCTGATGCAGGGACGAGAATAGAAGTGAAAGCACCACTTGAAAAGGAGGAACAGCATGACAA
TTAA


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure
  AlphaFold DB A0A2A4GVQ0

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  vraS Staphylococcus aureus N315

83.573

100

0.836