Detailed information NTG0793515

Bioinformatically predicted

Overview

• Name: chiS
• Type: Regulator
• Locus tag: PWW22_RS11885
• Genome accession: NZ_CP118578
• Coordinates: 2628622..2632008 (+)
• Length: 1128 a.a.
• NCBI ID: WP_009698734.1
• Uniprot ID: A0A9X3MHF7
• Organism: Vibrio harveyi strain fish2
• Function: chitin sensor (predicted from homology) Competence regulation

Genomic Context

Location: 2623622..2637008

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
PWW22_RS11860	erpA	2623963..2624304 (-)	342	WP_005449174.1	iron-sulfur cluster insertion protein ErpA	-
PWW22_RS11865	hemL	2624551..2625846 (+)	1296	WP_005449175.1	glutamate-1-semialdehyde 2,1-aminomutase	-
PWW22_RS11870	-	2626206..2627291 (+)	1086	WP_005449176.1	AI-2E family transporter	-
PWW22_RS11875	rsmC	2627368..2628393 (+)	1026	WP_050924925.1	16S rRNA (guanine(1207)-N(2))-methyltransferase RsmC	-
PWW22_RS11880	-	2628390..2628623 (-)	234	WP_029790366.1	hypothetical protein	-
PWW22_RS11885	chiS	2628622..2632008 (+)	3387	WP_009698734.1	response regulator	Regulator
PWW22_RS11890	-	2632829..2634511 (+)	1683	WP_005446317.1	ABC transporter substrate-binding protein	-
PWW22_RS11895	-	2634682..2635668 (+)	987	WP_005446316.1	ABC transporter permease	-
PWW22_RS11900	-	2635671..2636696 (+)	1026	WP_005446315.1	ABC transporter permease	-

Sequence

Protein

• Length: 1128 a.a.
• Molecular weight: 127417.17 Da
• Isoelectric Point: 5.3912

>NTDB_id=793515 PWW22_RS11885 WP_009698734.1 2628622..2632008(+) (chiS) [Vibrio harveyi strain fish2]
MFKFYKKQKFKRLQSTLMTAFLVLSITPLTITAIFFLQSHSKDLQEQSTSHLLSVRDTKQQQIIDYFAAQETEVMGFVRS
ELAYASGGRFYGLVNAFSRLGHDIDEARENAQQRYIKGSGDQIKTSILPESSNYVGSERYRLLHKRYHWAYLELLKRSDF
NDILLVDIDGNVTYSINKDDNYGTNLLTGRYKDTALGRTFKRLSEDVSARRKVNEDYTPVVVSDFDIENGKQVAWLGAPI
VQQGYLHSYAMFRLPNNGITKLIAEINRDSSIETLLVGSDHKPRTINTKQEEIQNSLEIVDKALAGDTEVGTYSNRLGEE
MIAAFAPIETRGLTWAIVVQLPEKEAFARVHQLEKLFVIAMLIAIILVVIASHYLSNFITSPLLKLTWAAEKVSAGDLDE
TTFNTERKDEIGRLAISFERMQRSIREKIQTIKQQNEELESNIKLIQKQNEELQLADKLKDEFLATTSHELRTPLHGMVG
IAETLVSGANGAIPASQKYQLDIIIKSGQRLANLVDDLLDYHKMRYGSMDIQKSAVSLASATRLVLELSSHLLGNKTIRI
INQVPADLKAVSADPQRLEQVLYNLIGNAIKYTSEGKIVISATVVDDQVRVQVVDTGQGIPAEHLEHIFEPLIQAGQDAS
RYRQGAGLGLSISRQLIELMGGSLYVSSQPMVGTTFSFTLPLANEEEIQATQSLAARGHFQIPEANFENNDDLSLPENPD
GPLLYVADDEPVNLRVLESFLRLEGYRVRTISDGPETLALIEQEKPELLLLDIMMPGMSGYQVCSELRETYDHAELPIIM
LTALSQTEDRVRGFEAGANDYLTKPFNKQELAARIQAHLTASKAEMRHIENKLLESELRQRAEVEASLLETQGRLLEQLE
SAPEAIICLREDQRIRFANEAACKLFKRSLEQLKRSSADELIAPKFLTVKQPHYCGKIDIYIEDIRQNIEADILKLPEGS
GLDVMYIFNVGGGANAARIHNLETAVEVLSSYAFDGDKDQLQKLKELGGEFTRLADKALGNKKDKQELMREVLVDTMTHA
LEYWESVTGETKFAFAEQSGLWRVYLDRSTLQTRTLDKYMRIETLPKTPRWRTVLSSIEFILEHCKEQSPERAYIEAQRD
KMQRLLTS

Nucleotide

• Length: 3387 bp

>NTDB_id=793515 PWW22_RS11885 WP_009698734.1 2628622..2632008(+) (chiS) [Vibrio harveyi strain fish2]
ATGTTTAAATTCTACAAAAAGCAGAAATTTAAGCGCCTGCAAAGCACGCTAATGACCGCGTTTTTGGTTCTTAGTATCAC
GCCACTGACGATAACTGCGATTTTCTTCCTGCAATCACACAGTAAAGATCTTCAAGAACAAAGCACATCGCACCTTCTTT
CAGTTCGTGATACCAAACAACAACAAATCATCGACTACTTTGCAGCTCAAGAGACTGAAGTCATGGGCTTCGTACGCTCC
GAACTTGCTTACGCCAGCGGCGGACGATTCTACGGTTTGGTCAATGCGTTTAGTCGCTTGGGTCACGATATTGATGAAGC
CAGAGAAAACGCACAGCAGCGCTATATCAAAGGCAGTGGCGATCAAATCAAAACCTCGATTTTACCGGAATCATCTAACT
ACGTTGGCAGCGAACGTTACCGCCTATTGCACAAACGTTACCACTGGGCATACCTAGAGCTGTTAAAGCGATCTGATTTT
AATGACATTTTATTGGTTGATATCGATGGTAATGTCACTTACTCAATCAATAAAGACGACAACTATGGCACTAACCTACT
GACAGGACGCTACAAAGATACGGCGCTAGGGCGCACCTTTAAACGTTTGTCTGAAGATGTGAGTGCACGTCGTAAGGTCA
ATGAAGATTACACGCCAGTTGTCGTGTCTGACTTTGATATCGAAAATGGTAAACAGGTCGCTTGGCTCGGCGCACCGATT
GTCCAACAAGGCTACCTGCACAGCTATGCGATGTTCCGCTTACCAAACAACGGCATTACTAAGCTTATTGCTGAAATCAA
CCGCGATTCCTCGATTGAAACCTTACTAGTGGGCAGCGATCATAAACCTCGCACCATTAACACCAAACAGGAAGAAATCC
AAAACAGCTTAGAGATTGTCGATAAAGCACTCGCAGGCGACACAGAAGTAGGTACTTACAGCAACCGCTTGGGTGAAGAG
ATGATTGCGGCATTTGCGCCAATTGAAACTCGCGGTCTAACTTGGGCGATTGTCGTACAACTTCCAGAAAAAGAAGCCTT
TGCTCGAGTCCACCAGCTCGAGAAGCTGTTTGTTATTGCGATGCTGATTGCGATCATCTTGGTTGTGATCGCCTCACACT
ACTTATCTAATTTCATCACCTCCCCGCTTCTTAAGCTGACTTGGGCAGCAGAGAAAGTATCTGCTGGTGATCTGGACGAA
ACGACCTTTAATACAGAGCGTAAAGATGAAATCGGTCGACTCGCGATCAGCTTTGAGCGCATGCAACGCTCAATTCGAGA
AAAGATCCAAACCATTAAGCAGCAAAATGAAGAGCTAGAAAGCAACATCAAATTGATCCAAAAGCAAAACGAAGAATTGC
AGTTGGCAGATAAGCTGAAAGATGAGTTCCTAGCGACAACCTCTCACGAGTTACGTACACCATTACACGGTATGGTCGGC
ATTGCAGAGACTTTAGTATCTGGTGCTAATGGTGCAATTCCTGCGAGTCAAAAATACCAATTGGATATCATCATCAAAAG
TGGTCAACGTTTGGCAAATCTTGTTGACGATTTATTGGATTACCACAAGATGCGCTATGGCAGCATGGATATCCAAAAAT
CGGCAGTGAGCCTAGCAAGTGCGACTCGCTTGGTGCTTGAGCTTTCAAGTCATCTACTAGGTAACAAGACGATTCGTATC
ATTAACCAGGTCCCTGCCGATCTAAAAGCGGTGTCTGCCGATCCACAACGCTTGGAACAAGTACTGTACAACCTAATTGG
TAATGCAATTAAATATACTTCTGAAGGTAAGATCGTAATTTCTGCCACCGTCGTGGACGATCAAGTCCGCGTACAAGTGG
TTGATACTGGCCAGGGTATCCCGGCTGAACATCTTGAGCATATCTTTGAACCTTTAATTCAAGCCGGCCAAGACGCTAGT
CGCTACCGTCAAGGCGCTGGTTTGGGTTTATCAATCAGCCGTCAACTTATCGAATTGATGGGTGGATCGTTATATGTAAG
TAGTCAACCAATGGTCGGCACTACATTTAGCTTTACTCTGCCACTTGCTAATGAAGAAGAGATTCAAGCAACACAGAGCC
TTGCGGCGCGTGGACACTTCCAAATTCCAGAAGCGAACTTTGAAAACAACGACGACTTATCATTACCAGAGAACCCTGAT
GGTCCGCTGTTGTATGTTGCTGATGACGAACCGGTTAACTTACGCGTTCTTGAAAGCTTCCTAAGGCTTGAAGGCTACCG
CGTACGCACTATTTCTGATGGTCCTGAAACACTTGCTTTAATCGAGCAAGAAAAACCAGAGTTGCTTCTACTCGATATCA
TGATGCCAGGCATGAGCGGCTATCAAGTATGTAGTGAGCTTCGAGAGACCTATGATCACGCAGAGCTTCCGATCATTATG
TTGACGGCCTTAAGTCAGACAGAAGATCGAGTAAGAGGCTTCGAAGCAGGTGCGAATGACTACTTAACCAAGCCATTCAA
TAAGCAGGAACTCGCCGCACGTATTCAAGCGCACTTGACCGCAAGTAAAGCAGAAATGCGCCACATCGAGAACAAGTTAC
TGGAATCGGAGCTGCGCCAGCGTGCTGAAGTAGAAGCTAGCTTGCTTGAGACTCAAGGTCGATTATTAGAACAACTAGAA
TCAGCACCTGAAGCCATTATTTGCCTTCGCGAGGATCAACGTATTCGCTTTGCGAACGAAGCGGCATGTAAGCTATTTAA
ACGCAGCTTAGAGCAGTTAAAACGCTCTTCGGCAGATGAACTTATTGCACCTAAATTCCTGACAGTTAAACAACCACATT
ACTGTGGCAAGATTGATATTTACATCGAAGATATTCGTCAAAACATTGAAGCAGACATTCTCAAATTACCTGAAGGCTCT
GGTCTAGATGTTATGTACATCTTTAACGTAGGCGGTGGTGCAAACGCAGCTCGTATCCATAATCTAGAAACCGCGGTTGA
AGTTCTATCAAGTTATGCGTTTGATGGTGATAAAGACCAATTGCAGAAGCTGAAAGAACTTGGCGGTGAGTTTACTCGCC
TTGCAGATAAAGCATTGGGGAACAAGAAAGATAAACAAGAGCTGATGCGCGAAGTATTAGTCGATACGATGACTCATGCA
TTGGAATACTGGGAATCAGTGACTGGAGAAACTAAGTTTGCTTTTGCGGAGCAAAGTGGTTTATGGCGTGTCTACCTCGA
CCGCAGTACGTTGCAAACTCGGACACTCGATAAATACATGCGCATTGAGACATTACCAAAAACACCGCGCTGGAGAACGG
TTCTAAGCTCAATCGAGTTCATTCTTGAGCACTGTAAAGAACAAAGCCCTGAACGAGCTTACATTGAAGCGCAACGCGAT
AAAATGCAAAGGCTCCTTACAAGTTAA

Domains

Predicted by InterproScan.

• HAMP domain (HAMP) (375-427)

• His Kinase A (phospho-acceptor) domain (HisKA) (460-525)

• Response regulator receiver domain (Response_reg) (726-836)

• Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase (HATPase_c) (574-683)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
chiS	Vibrio cholerae strain A1552	76.705	100	0.768