Detailed information NTG0792190

Bioinformatically predicted

Overview

• Name: pilA
• Type: Machinery gene
• Locus tag: PV005_RS16480
• Genome accession: NZ_CP118359
• Coordinates: 3442480..3443583 (+)
• Length: 367 a.a.
• NCBI ID: WP_023853086.1
• Uniprot ID: A0AAI9J0F0
• Organism: Bordetella pertussis strain SA25
• Function: assembly of type IV pilus (predicted from homology) DNA binding and uptake

Genomic Context

Location: 3437480..3448583

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
PV005_RS16455 (PV005_16470)	-	3439357..3439743 (+)	387	WP_003808567.1	MOSC N-terminal beta barrel domain-containing protein	-
PV005_RS16460 (PV005_16475)	-	3439751..3440884 (-)	1134	WP_010931494.1	benzoate/H(+) symporter BenE family transporter	-
PV005_RS16465 (PV005_16480)	-	3440948..3441199 (-)	252	WP_003808570.1	YfhL family 4Fe-4S dicluster ferredoxin	-
PV005_RS16470 (PV005_16485)	coaD	3441254..3441763 (-)	510	WP_003808574.1	pantetheine-phosphate adenylyltransferase	-
PV005_RS16475 (PV005_16490)	rsmD	3441784..3442404 (-)	621	WP_003808577.1	16S rRNA (guanine(966)-N(2))-methyltransferase RsmD	-
PV005_RS16480 (PV005_16495)	pilA	3442480..3443583 (+)	1104	WP_023853086.1	signal recognition particle-docking protein FtsY	Machinery gene
PV005_RS16485 (PV005_16500)	-	3443630..3445228 (-)	1599	Protein_3234	CYTH and CHAD domain-containing protein	-
PV005_RS16490 (PV005_16510)	phnE	3445413..3446234 (-)	822	WP_010931496.1	phosphonate ABC transporter, permease protein PhnE	-
PV005_RS16495 (PV005_16515)	phnE	3446231..3447100 (-)	870	WP_023998122.1	phosphonate ABC transporter, permease protein PhnE	-
PV005_RS16500 (PV005_16520)	-	3447118..3447603 (-)	486	Protein_3237	phosphonate ABC transporter ATP-binding protein	-
PV005_RS16505 (PV005_16525)	-	3447597..3448547 (-)	951	WP_005013747.1	IS481-like element IS481 family transposase	-

Sequence

Protein

• Length: 367 a.a.
• Molecular weight: 38499.02 Da
• Isoelectric Point: 6.5148

>NTDB_id=792190 PV005_RS16480 WP_023853086.1 3442480..3443583(+) (pilA) [Bordetella pertussis strain SA25]
MFSFFKKKSPPPAAPAQPAPPPEAVDAGSAAPAQPQPAEPQPEPQPQQPPEPQPPVAAAPEAPRKASWLSRLKQGLSRTG
QNIGGLFVGVKVDENLFEELESALIMADAGIEATEKLLAALRARVKKERIDDPAQVKTALRQLLADHLRPLERSFDLGRA
QPLVVMIAGVNGAGKTTSIGKLAHTFQRQGASVLLAAGDTFRAAAREQLVEWGSRNNVTVISQDGGDPAAVAFDSVNAGR
ARNVGVVMVDTAGRLPTQLHLMEELKKIRRVIGKAEASAPHEVLLVVDGNTGQNALAQIRAFDAAITLTGLVVTKLDGTA
KGGTLAAVAAGSQGVRPIPVYWIGVGEGLEDLQPFVADEFAAALLAD

Nucleotide

• Length: 1104 bp

>NTDB_id=792190 PV005_RS16480 WP_023853086.1 3442480..3443583(+) (pilA) [Bordetella pertussis strain SA25]
ATGTTCAGCTTCTTCAAGAAAAAATCCCCTCCGCCCGCCGCGCCGGCCCAGCCCGCGCCGCCGCCGGAGGCAGTGGACGC
AGGGTCAGCCGCACCTGCGCAGCCTCAACCCGCCGAGCCGCAGCCCGAGCCGCAGCCGCAACAACCGCCCGAGCCGCAGC
CACCGGTCGCGGCCGCGCCCGAGGCGCCCCGCAAGGCCTCGTGGCTGAGCCGGCTCAAACAGGGCCTGTCGCGCACCGGC
CAGAACATCGGCGGGCTGTTCGTCGGCGTGAAGGTCGACGAGAACCTGTTCGAGGAACTGGAGTCGGCGCTGATCATGGC
CGACGCGGGCATCGAGGCCACCGAGAAACTGCTGGCCGCGCTGCGCGCGCGCGTCAAGAAAGAGCGCATCGACGATCCGG
CGCAGGTCAAGACGGCGCTGCGCCAATTGCTGGCCGACCATCTGCGGCCGCTGGAGCGGTCCTTCGACCTGGGGCGGGCC
CAGCCCCTGGTGGTCATGATCGCCGGCGTCAACGGCGCGGGCAAGACGACCTCGATCGGCAAGCTGGCGCATACCTTCCA
GCGCCAGGGCGCCAGCGTGCTGCTGGCGGCCGGGGACACCTTCCGCGCGGCGGCGCGCGAGCAATTGGTCGAATGGGGCA
GCCGCAACAATGTGACCGTGATCTCGCAGGATGGCGGCGATCCGGCCGCGGTGGCGTTCGACTCGGTCAATGCCGGACGT
GCGCGCAACGTGGGCGTGGTGATGGTGGATACGGCCGGCCGCCTGCCCACGCAGCTGCACCTGATGGAAGAATTGAAGAA
GATCCGCCGCGTCATCGGCAAGGCCGAGGCCAGCGCGCCGCATGAAGTGCTGCTGGTGGTCGATGGCAACACCGGCCAGA
ACGCGCTGGCGCAAATCCGCGCCTTCGACGCCGCCATCACCCTCACCGGCCTGGTCGTCACCAAGCTGGACGGCACCGCC
AAGGGCGGCACGCTGGCGGCCGTGGCCGCCGGCAGCCAGGGCGTGCGGCCCATCCCGGTCTATTGGATCGGCGTGGGCGA
GGGGTTGGAGGACCTGCAGCCCTTCGTGGCCGACGAGTTCGCCGCCGCCCTGCTGGCCGACTGA

Domains

Predicted by InterproScan.

• SRP54-type protein, GTPase domain (SRP54) (163-365)

• SRP54-type protein, helical bundle domain (SRP54_N) (83-142)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
pilA	Neisseria gonorrhoeae MS11	53.913	94.005	0.507