Detailed information NTG0792177

Bioinformatically predicted

Overview

• Name: pilA
• Type: Machinery gene
• Locus tag: PV004_RS16600
• Genome accession: NZ_CP118358
• Coordinates: 3465656..3466759 (+)
• Length: 367 a.a.
• NCBI ID: WP_023853086.1
• Uniprot ID: A0AAI9J0F0
• Organism: Bordetella pertussis strain SA24
• Function: assembly of type IV pilus (predicted from homology) DNA binding and uptake

Genomic Context

Location: 3460656..3471759

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
PV004_RS16575 (PV004_16600)	-	3462533..3462919 (+)	387	WP_003808567.1	MOSC N-terminal beta barrel domain-containing protein	-
PV004_RS16580 (PV004_16605)	-	3462927..3464060 (-)	1134	WP_010931494.1	benzoate/H(+) symporter BenE family transporter	-
PV004_RS16585 (PV004_16610)	-	3464124..3464375 (-)	252	WP_003808570.1	YfhL family 4Fe-4S dicluster ferredoxin	-
PV004_RS16590 (PV004_16615)	coaD	3464430..3464939 (-)	510	WP_003808574.1	pantetheine-phosphate adenylyltransferase	-
PV004_RS16595 (PV004_16620)	rsmD	3464960..3465580 (-)	621	WP_003808577.1	16S rRNA (guanine(966)-N(2))-methyltransferase RsmD	-
PV004_RS16600 (PV004_16625)	pilA	3465656..3466759 (+)	1104	WP_023853086.1	signal recognition particle-docking protein FtsY	Machinery gene
PV004_RS16605 (PV004_16630)	-	3466806..3468404 (-)	1599	Protein_3253	CYTH and CHAD domain-containing protein	-
PV004_RS16610 (PV004_16640)	phnE	3468589..3469410 (-)	822	WP_010931496.1	phosphonate ABC transporter, permease protein PhnE	-
PV004_RS16615 (PV004_16645)	phnE	3469407..3470276 (-)	870	WP_023998122.1	phosphonate ABC transporter, permease protein PhnE	-
PV004_RS16620 (PV004_16650)	-	3470294..3470779 (-)	486	Protein_3256	phosphonate ABC transporter ATP-binding protein	-
PV004_RS16625 (PV004_16655)	-	3470773..3471723 (-)	951	WP_005013747.1	IS481-like element IS481 family transposase	-

Sequence

Protein

• Length: 367 a.a.
• Molecular weight: 38499.02 Da
• Isoelectric Point: 6.5148

>NTDB_id=792177 PV004_RS16600 WP_023853086.1 3465656..3466759(+) (pilA) [Bordetella pertussis strain SA24]
MFSFFKKKSPPPAAPAQPAPPPEAVDAGSAAPAQPQPAEPQPEPQPQQPPEPQPPVAAAPEAPRKASWLSRLKQGLSRTG
QNIGGLFVGVKVDENLFEELESALIMADAGIEATEKLLAALRARVKKERIDDPAQVKTALRQLLADHLRPLERSFDLGRA
QPLVVMIAGVNGAGKTTSIGKLAHTFQRQGASVLLAAGDTFRAAAREQLVEWGSRNNVTVISQDGGDPAAVAFDSVNAGR
ARNVGVVMVDTAGRLPTQLHLMEELKKIRRVIGKAEASAPHEVLLVVDGNTGQNALAQIRAFDAAITLTGLVVTKLDGTA
KGGTLAAVAAGSQGVRPIPVYWIGVGEGLEDLQPFVADEFAAALLAD

Nucleotide

• Length: 1104 bp

>NTDB_id=792177 PV004_RS16600 WP_023853086.1 3465656..3466759(+) (pilA) [Bordetella pertussis strain SA24]
ATGTTCAGCTTCTTCAAGAAAAAATCCCCTCCGCCCGCCGCGCCGGCCCAGCCCGCGCCGCCGCCGGAGGCAGTGGACGC
AGGGTCAGCCGCACCTGCGCAGCCTCAACCCGCCGAGCCGCAGCCCGAGCCGCAGCCGCAACAACCGCCCGAGCCGCAGC
CACCGGTCGCGGCCGCGCCCGAGGCGCCCCGCAAGGCCTCGTGGCTGAGCCGGCTCAAACAGGGCCTGTCGCGCACCGGC
CAGAACATCGGCGGGCTGTTCGTCGGCGTGAAGGTCGACGAGAACCTGTTCGAGGAACTGGAGTCGGCGCTGATCATGGC
CGACGCGGGCATCGAGGCCACCGAGAAACTGCTGGCCGCGCTGCGCGCGCGCGTCAAGAAAGAGCGCATCGACGATCCGG
CGCAGGTCAAGACGGCGCTGCGCCAATTGCTGGCCGACCATCTGCGGCCGCTGGAGCGGTCCTTCGACCTGGGGCGGGCC
CAGCCCCTGGTGGTCATGATCGCCGGCGTCAACGGCGCGGGCAAGACGACCTCGATCGGCAAGCTGGCGCATACCTTCCA
GCGCCAGGGCGCCAGCGTGCTGCTGGCGGCCGGGGACACCTTCCGCGCGGCGGCGCGCGAGCAATTGGTCGAATGGGGCA
GCCGCAACAATGTGACCGTGATCTCGCAGGATGGCGGCGATCCGGCCGCGGTGGCGTTCGACTCGGTCAATGCCGGACGT
GCGCGCAACGTGGGCGTGGTGATGGTGGATACGGCCGGCCGCCTGCCCACGCAGCTGCACCTGATGGAAGAATTGAAGAA
GATCCGCCGCGTCATCGGCAAGGCCGAGGCCAGCGCGCCGCATGAAGTGCTGCTGGTGGTCGATGGCAACACCGGCCAGA
ACGCGCTGGCGCAAATCCGCGCCTTCGACGCCGCCATCACCCTCACCGGCCTGGTCGTCACCAAGCTGGACGGCACCGCC
AAGGGCGGCACGCTGGCGGCCGTGGCCGCCGGCAGCCAGGGCGTGCGGCCCATCCCGGTCTATTGGATCGGCGTGGGCGA
GGGGTTGGAGGACCTGCAGCCCTTCGTGGCCGACGAGTTCGCCGCCGCCCTGCTGGCCGACTGA

Domains

Predicted by InterproScan.

• SRP54-type protein, GTPase domain (SRP54) (163-365)

• SRP54-type protein, helical bundle domain (SRP54_N) (83-142)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
pilA	Neisseria gonorrhoeae MS11	53.913	94.005	0.507