Detailed information NTG0791379

Bioinformatically predicted

Overview

• Name: recD/recD2/recDB
• Type: Machinery gene
• Locus tag: Q7623_RS02280
• Genome accession: NZ_CP131710
• Coordinates: 417348..419714 (-)
• Length: 788 a.a.
• NCBI ID: WP_000454500.1
• Uniprot ID: -
• Organism: Streptococcus pneumoniae strain 2014S11-203
• Function: homologous recombination (predicted from homology) Homologous recombination

Genomic Context

Location: 412348..424714

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
Q7623_RS02245 (Q7623_02235)	vraR	412700..413332 (+)	633	WP_000698433.1	response regulator transcription factor	Regulator
Q7623_RS02250 (Q7623_02240)	-	413333..413575 (+)	243	Protein_441	DNA alkylation repair protein	-
Q7623_RS02255 (Q7623_02245)	-	413500..414102 (+)	603	Protein_442	DNA alkylation repair protein	-
Q7623_RS02260 (Q7623_02250)	-	414252..414491 (+)	240	WP_000754501.1	hypothetical protein	-
Q7623_RS02265 (Q7623_02255)	cbpG	414572..415162 (+)	591	Protein_444	choline-binding protein CbpG	-
Q7623_RS02270 (Q7623_02260)	-	415464..415856 (+)	393	WP_000378125.1	tyrosine-type recombinase/integrase	-
Q7623_RS02275 (Q7623_02265)	tig	416017..417300 (+)	1284	WP_000116465.1	trigger factor	-
Q7623_RS02280 (Q7623_02270)	recD/recD2/recDB	417348..419714 (-)	2367	WP_000454500.1	ATP-dependent RecD-like DNA helicase	Machinery gene
Q7623_RS02285 (Q7623_02275)	lepB	419842..420456 (-)	615	WP_001083986.1	signal peptidase I	-
Q7623_RS02290 (Q7623_02280)	rnhC	420460..421341 (-)	882	WP_000146869.1	ribonuclease HIII	-
Q7623_RS02295 (Q7623_02285)	zapA	421428..421730 (+)	303	WP_000002019.1	cell division protein ZapA	-
Q7623_RS02300 (Q7623_02290)	-	421727..422275 (+)	549	WP_000622953.1	CvpA family protein	-

Sequence

Protein

• Length: 788 a.a.
• Molecular weight: 88490.24 Da
• Isoelectric Point: 4.5258

>NTDB_id=791379 Q7623_RS02280 WP_000454500.1 417348..419714(-) (recD/recD2/recDB) [Streptococcus pneumoniae strain 2014S11-203]
MEVYFSGTIERIIFENPSNFYRILLLEIDDTDAEDFDDFEIIVTGTMADVIEGEDYTFWGQIVQHSKYGEQLQISRYDRA
KPTSKGLVKYFSSSHFKGIGLKTAQKIVDTYGENTIDEILQHPEKLEGIAGLSAKNREAFVSTLRLNYGTEMVLSKLANY
GIPNKLAFQIQDFYKEETLDVVENYPYQLVEDIKGLGFTIADQLAEELGIESQAPERFRAGLVHSLFQACMETGDTYVEA
RDLLEQTLTLLESSRPVELDPGQVAQELSYLIEEDKVQQIDTKIFDNSLFFAEEGIRSHLIRILEKGKQKSQDLETIQKH
ITTVEQELGIEYDNIQKQAICDAIQNKVFILTGGPGTGKTTVINGIIAVYALLEGLDLRKKSNLPILLAAPTGRAARRMN
ELTGLPSATIHRHLGMTGDDDTSHLEDYLDADFIIVDEFSMVDTWLANQLFSNISSNSKILIVGDSDQLPSVSPGQVLAD
LLHIPLIPQTRLEKIYRQSEESTIVTLASQIRQGILPADFTQKKADRSYFEIASGHIPATIEKILGAALRNSIPAHDIQV
LAPMYRGTAGIDAINQLMQDLLNPPQKDQLSFEAPQCHYRKGDKVIHLVNDAEINVFNGDLGAITDLIPGKYTESKQDEI
VIDFDGNEVSYPRNEWYKIRLAYAMSIHKSQGSEFPVVILPITSASRRMLERNLIYTAITRAKSKLILLGELQAFDYATQ
HIGTARKTYLIERFSDLLENVEEKQQAVSETVTSSASEQSYILTEENWDRIPAMIGITDTDLKEIFGK

Nucleotide

• Length: 2367 bp

>NTDB_id=791379 Q7623_RS02280 WP_000454500.1 417348..419714(-) (recD/recD2/recDB) [Streptococcus pneumoniae strain 2014S11-203]
ATGGAAGTTTATTTTTCAGGAACCATTGAACGGATTATTTTTGAAAATCCCAGCAATTTTTATCGCATCCTCCTCCTAGA
AATCGACGATACGGACGCAGAGGATTTTGATGATTTTGAAATCATTGTCACAGGAACCATGGCTGATGTAATTGAGGGCG
AAGACTATACTTTTTGGGGGCAAATTGTCCAGCACTCCAAGTATGGAGAACAACTGCAAATCAGTCGTTATGATCGCGCA
AAACCAACTAGTAAGGGCTTGGTCAAGTACTTTTCAAGTAGCCATTTCAAGGGGATTGGTCTCAAGACAGCTCAGAAAAT
CGTGGATACCTATGGCGAAAATACCATTGACGAAATTTTGCAACACCCAGAAAAGTTAGAAGGCATCGCAGGACTCTCTG
CCAAAAATCGCGAGGCTTTCGTCTCCACTCTCCGTCTCAACTACGGAACGGAGATGGTTTTGTCCAAACTAGCCAACTAC
GGCATTCCCAACAAACTAGCCTTTCAGATTCAAGACTTTTACAAGGAAGAAACCCTTGATGTGGTTGAAAATTATCCCTA
CCAGCTGGTTGAGGATATCAAGGGTTTGGGCTTTACCATTGCTGACCAACTAGCTGAGGAACTAGGCATCGAAAGTCAGG
CTCCTGAACGCTTCCGCGCCGGTCTAGTTCACAGTCTTTTTCAGGCCTGTATGGAAACAGGGGACACCTATGTTGAAGCA
CGGGATTTGCTGGAACAAACCCTTACTCTCCTTGAGTCTTCCCGTCCCGTGGAACTAGACCCCGGCCAAGTTGCCCAAGA
GCTCTCCTACCTGATCGAAGAAGACAAGGTTCAGCAGATTGATACCAAGATCTTTGACAACAGCCTCTTTTTCGCTGAGG
AAGGTATCCGCAGTCACTTGATTCGTATCCTTGAAAAAGGAAAACAGAAGAGCCAAGATTTAGAAACTATTCAAAAGCAT
ATCACTACTGTCGAGCAAGAACTGGGGATTGAGTATGATAACATTCAAAAACAGGCTATCTGTGATGCTATCCAGAATAA
GGTCTTTATCCTGACAGGTGGACCTGGTACTGGTAAGACAACTGTTATCAATGGGATCATCGCTGTTTACGCCCTGTTAG
AGGGACTTGACCTCAGGAAGAAAAGCAACCTGCCCATTCTTCTTGCTGCTCCAACTGGTCGAGCTGCTCGTCGCATGAAT
GAATTGACAGGTTTGCCTAGCGCGACCATACACCGCCACTTGGGAATGACAGGTGACGATGATACCAGTCATCTGGAAGA
TTACCTAGATGCTGACTTTATCATCGTGGATGAATTCTCTATGGTGGATACTTGGCTGGCCAATCAACTCTTCTCCAATA
TCTCTTCTAACAGTAAGATCCTCATCGTAGGTGACAGTGATCAGCTACCTTCTGTCAGTCCTGGACAGGTTCTAGCGGAT
CTGCTTCATATTCCTTTGATTCCTCAGACTCGCTTGGAAAAAATTTATCGACAAAGCGAAGAATCAACCATCGTCACCCT
AGCTAGTCAGATTCGACAGGGCATCTTGCCAGCTGATTTCACCCAAAAAAAAGCTGACCGTTCCTACTTTGAAATTGCTA
GTGGCCATATTCCTGCCACTATTGAAAAAATCTTAGGTGCCGCCCTCAGAAATAGTATTCCTGCCCATGATATCCAAGTT
CTGGCTCCTATGTACCGAGGGACGGCAGGGATTGATGCTATCAATCAGCTCATGCAAGACCTGCTCAATCCCCCACAAAA
AGATCAACTCAGTTTTGAAGCTCCTCAGTGCCACTATCGTAAGGGAGACAAGGTCATTCATTTGGTTAACGATGCTGAAA
TCAATGTCTTTAATGGGGATTTAGGAGCTATCACAGACCTGATTCCTGGTAAATACACCGAATCGAAACAAGACGAGATT
GTCATTGATTTTGATGGTAATGAAGTCTCTTACCCCCGTAACGAATGGTACAAGATTCGCTTGGCCTATGCCATGAGTAT
TCATAAGTCTCAGGGAAGTGAGTTCCCAGTTGTCATCCTACCGATTACTAGTGCTAGCCGACGTATGCTGGAGCGAAATC
TCATCTACACAGCCATTACACGTGCCAAAAGCAAACTCATCTTACTAGGCGAATTACAAGCCTTCGACTATGCTACCCAA
CACATCGGAACTGCCCGAAAAACCTATCTGATTGAACGCTTCAGTGATCTACTGGAGAATGTTGAAGAAAAGCAACAAGC
TGTCTCTGAAACAGTCACATCAAGTGCCTCTGAACAATCCTACATCCTAACCGAAGAAAACTGGGACCGCATCCCAGCCA
TGATTGGGATTACAGACACAGACCTCAAAGAGATTTTTGGAAAATAG

Domains

Predicted by InterProScan.

• Helix-hairpin-helix containing domain (HHH_RecD2) (148-237)

• UvrD-like helicase C-terminal domain (UvrD_C_2) (662-709)

• AAA domain (AAA_30) (332-520)

• ATP-dependent RecD-like DNA helicase SH3 domain (SH3_13) (574-644)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
recD/recD2/recDB	Bacillus subtilis subsp. subtilis str. 168	40.885	97.462	0.398