Detailed information    

insolico Bioinformatically predicted

Overview

Name   brsR   Type   Regulator
Locus tag   QMM27_RS00805 Genome accession   NZ_AP025939
Coordinates   150928..151368 (-) Length   146 a.a.
NCBI ID   WP_000861968.1    Uniprot ID   -
Organism   Streptococcus pneumoniae strain Utah_35B-24     
Function   antagonizing the proteolysis of ComX (predicted from homology)   
Competence regulation

Genomic Context

Location: 145928..156368
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  QMM27_RS00780 (Utah35B_01440) - 146189..147475 (+) 1287 WP_000278868.1 response regulator transcription factor -
  QMM27_RS00785 (Utah35B_01450) - 147527..148060 (+) 534 WP_000729029.1 hypothetical protein -
  QMM27_RS00790 (Utah35B_01460) nrdI 148138..148608 (+) 471 WP_000849621.1 class Ib ribonucleoside-diphosphate reductase assembly flavoprotein NrdI -
  QMM27_RS00795 (Utah35B_01470) - 148901..150163 (-) 1263 WP_000075789.1 NRAMP family divalent metal transporter -
  QMM27_RS00800 (Utah35B_01480) - 150473..150931 (-) 459 WP_000745059.1 DUF3021 domain-containing protein -
  QMM27_RS00805 (Utah35B_01490) brsR 150928..151368 (-) 441 WP_000861968.1 LytTR family DNA-binding domain-containing protein Regulator
  QMM27_RS00810 (Utah35B_01500) hexB 151724..153673 (+) 1950 WP_000018159.1 DNA mismatch repair endonuclease MutL Machinery gene
  QMM27_RS00815 (Utah35B_01510) ribE 153998..154465 (-) 468 WP_001099502.1 6,7-dimethyl-8-ribityllumazine synthase -
  QMM27_RS00820 (Utah35B_01520) - 154466..155671 (-) 1206 WP_016399605.1 bifunctional 3,4-dihydroxy-2-butanone-4-phosphate synthase/GTP cyclohydrolase II -
  QMM27_RS00825 (Utah35B_01530) ribE 155691..156326 (-) 636 WP_016398423.1 riboflavin synthase -

Sequence

Protein


Download         Length: 146 a.a.        Molecular weight: 17137.81 Da        Isoelectric Point: 5.9797

>NTDB_id=79122 QMM27_RS00805 WP_000861968.1 150928..151368(-) (brsR) [Streptococcus pneumoniae strain Utah_35B-24]
MKVELQISETYEEEKLIVQAPQPTDKVQKVIEFAENLDQREKIKGKIDDQVYLVEIGKIQRFYIENRKVLAETASQTYSI
DLRLYQVLKLLPTNFIQISQSEIINIDSISHLKLTPNGLVEIFLKNESFTYSSRRYLKTIKEKLEL

Nucleotide


Download         Length: 441 bp        

>NTDB_id=79122 QMM27_RS00805 WP_000861968.1 150928..151368(-) (brsR) [Streptococcus pneumoniae strain Utah_35B-24]
ATGAAAGTAGAACTACAGATTAGTGAGACTTACGAGGAGGAAAAGCTGATTGTCCAAGCACCTCAGCCGACAGATAAAGT
CCAGAAAGTCATCGAGTTCGCAGAAAATCTGGACCAAAGAGAAAAAATCAAAGGGAAAATCGATGATCAGGTCTATCTAG
TTGAGATTGGCAAGATTCAGCGCTTCTATATCGAGAATCGGAAGGTTCTAGCAGAAACCGCGAGTCAGACCTACAGCATT
GATTTGCGACTCTATCAGGTTCTTAAACTCTTGCCAACCAATTTTATCCAAATTTCCCAATCAGAAATCATCAATATCGA
TTCCATCTCTCACCTCAAGCTCACGCCAAACGGTCTGGTAGAAATTTTCTTGAAAAACGAAAGCTTCACCTACTCTTCAC
GCCGTTATCTAAAAACCATCAAGGAGAAATTAGAACTATGA

Domains

Predicted by InterProScan.

LytTr DNA-binding domain (LytTR)

(50-144)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  brsR Streptococcus mutans UA159

36.054

100

0.363

Multiple sequence alignment