Detailed information NTG0079108

Bioinformatically predicted

Overview

• Name: recF
• Type: Machinery gene
• Locus tag: QMM10_RS10475
• Genome accession: NZ_AP025938
• Coordinates: 2063491..2064588 (+)
• Length: 365 a.a.
• NCBI ID: WP_050207061.1
• Uniprot ID: -
• Organism: Streptococcus pneumoniae strain PZ900701057
• Function: homologous recombination (predicted from homology) Homologous recombination

Genomic Context

Location: 2058491..2069588

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
QMM10_RS10450 (PC1044_20180)	pgsA	2059012..2059557 (-)	546	WP_000712132.1	CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase	-
QMM10_RS10455 (PC1044_20190)	rodZ	2059568..2060389 (-)	822	WP_001227958.1	cytoskeleton protein RodZ	-
QMM10_RS10460 (PC1044_20200)	-	2060431..2061714 (-)	1284	WP_281737392.1	pitrilysin family protein	-
QMM10_RS10465 (PC1044_20210)	-	2061711..2062961 (-)	1251	WP_050091322.1	pitrilysin family protein	-
QMM10_RS10470 (PC1044_20220)	-	2063120..2063488 (+)	369	WP_000455898.1	RNA-binding S4 domain-containing protein	-
QMM10_RS10475 (PC1044_20230)	recF	2063491..2064588 (+)	1098	WP_050207061.1	DNA replication/repair protein RecF	Machinery gene
QMM10_RS10480 (PC1044_20240)	guaB	2064639..2066117 (-)	1479	WP_000073428.1	IMP dehydrogenase	-
QMM10_RS10485 (PC1044_20250)	trpS	2066269..2067294 (-)	1026	WP_000165444.1	tryptophan--tRNA ligase	-
QMM10_RS10490 (PC1044_20260)	-	2067500..2069122 (+)	1623	WP_000958760.1	ATP-binding cassette domain-containing protein	-

Sequence

Protein

• Length: 365 a.a.
• Molecular weight: 41884.00 Da
• Isoelectric Point: 9.0596

>NTDB_id=79108 QMM10_RS10475 WP_050207061.1 2063491..2064588(+) (recF) [Streptococcus pneumoniae strain PZ900701057]
MWLQHLSLKTFRNYKETKIDFNPKLNVFLGRNAQGKTNMLEAIYFLALTRSHRTRTDKNLIHFDEEQLHLSGLVQKKTGS
IPLEIELTQKGRVTKVNHLKQARLSDYVGHMNVVLFAPEDLQLIKGAPSIRRKFIDMELGQIKPIYLSDLTNYNHILKQR
NTYLKSAQKIDETFLSVLDDQLVDYGCRVMNHRLDFIKKLESFGRKKHFELSNQIEELSISYQSAVNITDKQNLSESFKI
ALEKSRSRDLFKKNTGVGPHRDDISFYINGMDASFGSQGQHRSLVLSIKLAEIELMESITTESPILLLDDVMSELDNTRQ
LKLLETISQSIQTFITTTSLDHLQNLPENLSIFTIQDGKAAVNGN

Nucleotide

• Length: 1098 bp

>NTDB_id=79108 QMM10_RS10475 WP_050207061.1 2063491..2064588(+) (recF) [Streptococcus pneumoniae strain PZ900701057]
ATGTGGCTACAACATCTATCTCTCAAGACTTTTCGTAATTACAAAGAAACGAAAATAGACTTTAATCCTAAATTGAATGT
CTTTTTGGGACGTAATGCACAAGGAAAAACAAACATGTTAGAGGCTATCTATTTTTTAGCCTTAACGCGTAGTCATCGAA
CTCGAACAGATAAAAATCTCATTCATTTTGATGAGGAACAACTTCATCTTTCAGGTCTCGTTCAGAAAAAAACTGGATCC
ATTCCCCTAGAAATCGAACTAACACAAAAAGGCCGTGTAACAAAAGTTAATCACTTAAAACAGGCACGCCTTTCAGATTA
TGTAGGACACATGAATGTTGTCTTATTTGCTCCTGAAGATTTACAACTAATTAAAGGAGCACCTTCGATTCGACGAAAAT
TCATTGATATGGAACTTGGGCAAATTAAGCCAATCTATTTATCTGACTTAACCAATTATAACCACATCCTAAAGCAAAGA
AACACTTACCTAAAATCAGCTCAAAAAATAGATGAAACATTCCTTTCTGTGTTAGATGATCAGCTAGTTGATTATGGATG
TCGTGTAATGAATCACCGCTTAGATTTCATAAAAAAACTAGAATCATTTGGGCGTAAGAAACATTTTGAACTCTCTAATC
AGATCGAAGAGTTGTCAATATCCTATCAATCTGCTGTCAATATAACTGACAAACAAAACTTATCCGAATCTTTCAAAATT
GCTTTAGAAAAAAGTAGATCCAGAGATTTATTTAAAAAGAATACTGGTGTCGGTCCTCATCGAGATGACATTTCTTTTTA
TATAAATGGGATGGATGCTAGTTTCGGAAGCCAAGGTCAACATCGTAGTCTCGTCCTCTCGATAAAATTAGCAGAAATCG
AATTAATGGAAAGCATTACCACAGAATCTCCTATATTACTGCTTGACGATGTGATGAGTGAACTTGACAACACTAGACAG
TTAAAATTATTAGAAACGATTTCTCAATCAATCCAAACCTTTATCACAACAACAAGCTTAGACCATCTTCAAAATCTGCC
AGAAAATCTAAGTATCTTCACTATTCAGGATGGTAAAGCTGCTGTAAATGGAAATTGA

Domains

Predicted by InterProScan.

• RecF/RecN/SMC N terminal domain (SMC_N) (3-358)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
recF	Streptococcus pneumoniae R6	99.452	100	0.995
recF	Bacillus subtilis subsp. subtilis str. 168	46.175	100	0.463