Detailed information    

insolico Bioinformatically predicted

Overview


Name   letA   Type   Regulator
Locus tag   OO714_RS16950 Genome accession   NZ_AP025740
Coordinates   3592909..3593544 (+) Length   211 a.a.
NCBI ID   WP_000633799.1    Uniprot ID   A0AA36K8B3
Organism   Acinetobacter baumannii strain ATCC 19606     
Function   regulate competence development (predicted from homology)   
Competence regulation

Genomic Context


Location: 3587909..3598544
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  OO714_RS16930 (KAMO5_33680) - 3587985..3588800 (+) 816 WP_000011163.1 DsbC family protein -
  OO714_RS16935 (KAMO5_33690) - 3589045..3590346 (+) 1302 WP_000805827.1 homoserine dehydrogenase -
  OO714_RS16940 (KAMO5_33700) thrC 3590402..3591541 (+) 1140 WP_000063594.1 threonine synthase -
  OO714_RS16945 (KAMO5_33710) pbpG 3591650..3592696 (-) 1047 WP_001984577.1 D-alanyl-D-alanine endopeptidase PBP7/8 -
  OO714_RS16950 (KAMO5_33720) letA 3592909..3593544 (+) 636 WP_000633799.1 response regulator Regulator
  OO714_RS16955 (KAMO5_33730) pilS 3593555..3595123 (+) 1569 WP_001160331.1 PAS domain-containing sensor histidine kinase Regulator
  OO714_RS16960 (KAMO5_33740) - 3595147..3596568 (+) 1422 WP_000840559.1 sigma-54 dependent transcriptional regulator -
  OO714_RS16965 (KAMO5_33750) - 3596572..3597756 (-) 1185 WP_000939110.1 S41 family peptidase -

Sequence


Protein


Download         Length: 211 a.a.        Molecular weight: 23147.79 Da        Isoelectric Point: 5.0959

>NTDB_id=78746 OO714_RS16950 WP_000633799.1 3592909..3593544(+) (letA) [Acinetobacter baumannii strain ATCC 19606]
MITVLVVDDHELVRTGICRMLEDHADVEVIGQAESGEEAIAIVRQQHPQVVLLDVNMPGIGGVETTRRLLQTAPETKVIA
VSGLAEEPYPSLLLKAGAKGYITKGAPIAEMVRAINKVMQGGKYFSADIAEQLASSYLSDTQQSPFDSLSEREMQVAMMV
VNCISAQEIADKLFVSVKTVNTYRYRIFEKLGIDSDVKLTHLAIRYGLIKP

Nucleotide


Download         Length: 636 bp        

>NTDB_id=78746 OO714_RS16950 WP_000633799.1 3592909..3593544(+) (letA) [Acinetobacter baumannii strain ATCC 19606]
TTGATTACAGTTTTAGTTGTCGATGACCATGAACTGGTACGTACGGGTATTTGCCGTATGTTAGAAGATCATGCCGATGT
TGAGGTAATTGGACAAGCCGAATCGGGCGAAGAAGCAATTGCTATCGTTCGCCAACAACATCCGCAAGTCGTACTGCTGG
ATGTCAACATGCCGGGCATCGGTGGTGTAGAAACAACCCGTCGTTTATTACAGACGGCTCCAGAGACGAAAGTCATTGCT
GTAAGCGGCCTTGCCGAAGAGCCTTACCCATCTTTATTATTAAAAGCCGGTGCAAAAGGCTATATCACTAAAGGCGCGCC
AATTGCCGAAATGGTTCGTGCAATTAATAAGGTCATGCAAGGCGGTAAATATTTTAGTGCAGATATTGCCGAACAACTCG
CGAGCTCATATTTATCCGACACTCAACAATCCCCTTTTGATTCATTATCGGAACGGGAAATGCAAGTTGCAATGATGGTC
GTCAACTGTATTAGCGCCCAAGAAATTGCCGATAAACTTTTTGTAAGTGTGAAAACTGTAAATACTTACCGTTATCGTAT
TTTTGAAAAGTTAGGAATTGATAGCGATGTAAAACTAACACATCTTGCGATTCGTTACGGTTTGATCAAGCCATAA


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure
  AlphaFold DB A0AA36K8B3

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  letA Legionella pneumophila str. Paris

55.238

99.526

0.55

  letA Legionella pneumophila strain ERS1305867

55.238

99.526

0.55