Detailed information NTG0786206

Bioinformatically predicted

Overview

• Name: pilR
• Type: Regulator
• Locus tag: PGW99_RS00905
• Genome accession: NZ_CP117520
• Coordinates: 174512..175924 (-)
• Length: 470 a.a.
• NCBI ID: WP_273778212.1
• Uniprot ID: -
• Organism: Acinetobacter sp. GSS19
• Function: regulation of type IV pilus assembly (predicted from homology) Competence regulation

Genomic Context

Location: 169512..180924

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
PGW99_RS00890	lptG	170573..171643 (+)	1071	WP_273778209.1	LPS export ABC transporter permease LptG	-
PGW99_RS00895	gpmI	171770..173317 (+)	1548	WP_273778210.1	2,3-bisphosphoglycerate-independent phosphoglycerate mutase	-
PGW99_RS00900	-	173334..174509 (+)	1176	WP_273778211.1	S41 family peptidase	-
PGW99_RS00905	pilR	174512..175924 (-)	1413	WP_273778212.1	sigma-54 dependent transcriptional regulator	Regulator
PGW99_RS00910	pilS	175921..177507 (-)	1587	WP_273779381.1	PAS domain-containing sensor histidine kinase	Regulator
PGW99_RS00915	-	177519..178154 (-)	636	WP_273778213.1	response regulator	-
PGW99_RS00920	pbpG	178370..179425 (+)	1056	WP_273779382.1	D-alanyl-D-alanine endopeptidase PBP7/8	-
PGW99_RS00925	thrC	179521..180666 (-)	1146	WP_273778214.1	threonine synthase	-

Sequence

Protein

• Length: 470 a.a.
• Molecular weight: 52670.62 Da
• Isoelectric Point: 6.1423

>NTDB_id=786206 PGW99_RS00905 WP_273778212.1 174512..175924(-) (pilR) [Acinetobacter sp. GSS19]
MTEKQALVLLVDDEEDLCTLMQMTLARMGIKTHIAHSLQRARYFFTQYQYDACLTDLNMPDGNGLELVELVTRCYPNTPI
AVLTAYGSMDIAVSALKAGAFDFVSKPINQKHLTQLLQKALNLPKSWCPAAEDRPENRLLIGRSEPIQQLRADLNKIVRS
QAPVFITGESGSGKEVVARLIHQLSNRNQGPFIAINCGAIPAELMESELFGYKKGSFSGAAQDKQGLIQAANGGSLFLDE
IAELPLNMQVKLLRVLQDKQVRPLGSDQEIDVDFRIISASHQNLTSLVQQGKFRQDLFFRLHVIDVVLPPLRERGQDILL
LADHFIQQVCDEWDLPVKSLSKAAQQFLLQQHFPGNVRELRNMVERAIAFCDETELQVEDLQNSISPPLQPAAPQQESAS
ATTIHAPGVLYGQLPAEGLEHYLERIEKELLLKALDMTHWNRTLAAKKLGMSFRSLRYRLKKLGLDSEVE

Nucleotide

• Length: 1413 bp

>NTDB_id=786206 PGW99_RS00905 WP_273778212.1 174512..175924(-) (pilR) [Acinetobacter sp. GSS19]
ATGACAGAAAAACAAGCCCTCGTCTTATTGGTGGATGATGAAGAAGACTTATGTACGCTGATGCAGATGACCCTGGCACG
TATGGGCATCAAGACGCATATTGCGCATAGTTTACAACGTGCGCGCTATTTCTTTACCCAATACCAGTACGATGCCTGTC
TGACCGATTTAAACATGCCAGATGGTAACGGTCTGGAGTTGGTCGAACTGGTCACACGCTGTTATCCCAACACACCGATT
GCCGTACTGACCGCCTATGGCAGTATGGATATTGCAGTCAGTGCATTAAAAGCCGGAGCCTTTGATTTTGTCAGTAAACC
GATTAATCAGAAGCATTTAACCCAACTATTACAAAAAGCCCTCAATCTGCCGAAATCCTGGTGTCCTGCCGCCGAAGATC
GTCCCGAAAATCGCCTGTTGATCGGCCGTTCCGAGCCCATTCAGCAGCTACGGGCAGACCTGAATAAAATTGTCCGTTCT
CAGGCACCTGTTTTTATTACCGGGGAATCCGGCAGTGGCAAAGAAGTGGTCGCACGTTTGATTCATCAGCTCAGTAACCG
CAATCAGGGACCTTTTATTGCGATTAACTGTGGGGCAATTCCGGCAGAGTTGATGGAAAGTGAGCTGTTCGGCTATAAGA
AAGGCAGCTTTAGCGGGGCAGCACAAGACAAACAGGGACTGATCCAGGCAGCCAATGGTGGCAGTTTATTCTTGGATGAA
ATTGCTGAATTGCCGCTTAATATGCAGGTCAAACTGCTACGAGTGCTGCAGGACAAACAGGTTCGCCCACTCGGCAGTGA
TCAGGAAATTGATGTCGATTTTCGCATCATCAGTGCCAGCCATCAGAATCTGACCAGTCTCGTGCAACAGGGGAAATTCC
GTCAGGATTTGTTCTTCCGCCTGCATGTGATTGATGTAGTGCTTCCTCCCTTAAGAGAACGAGGACAGGATATTCTGTTA
TTGGCAGACCATTTTATTCAGCAGGTGTGTGATGAGTGGGATCTGCCCGTGAAATCGCTGAGTAAAGCAGCCCAGCAGTT
TTTGCTACAGCAGCATTTTCCAGGTAATGTGCGTGAATTGCGCAATATGGTGGAACGTGCCATCGCATTCTGCGACGAGA
CCGAATTGCAAGTGGAAGACCTGCAAAACAGCATTTCCCCCCCTCTGCAACCAGCAGCGCCTCAACAGGAATCTGCTTCA
GCCACGACTATCCATGCTCCGGGTGTCCTCTATGGTCAACTTCCAGCTGAAGGGTTAGAGCATTATCTGGAAAGAATCGA
AAAAGAGCTGCTGTTAAAGGCACTTGATATGACCCACTGGAACCGTACGCTAGCGGCCAAGAAACTCGGCATGAGTTTCC
GTTCCTTACGCTACCGGCTAAAAAAACTGGGCTTGGATTCCGAGGTCGAATAA

Domains

Predicted by InterproScan.

• Response regulator receiver domain (Response_reg) (8-117)

• Sigma-54 interaction domain (Sigma54_activat) (140-306)

• Bacterial regulatory protein, Fis family (HTH_8) (423-463)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
pilR	Acinetobacter baumannii strain A118	69.684	100	0.704
pilR	Pseudomonas aeruginosa PAK	50	99.149	0.496