Detailed information NTG0781209

Bioinformatically predicted

Overview

• Name: recD/recD2/recDB
• Type: Machinery gene
• Locus tag: QZH48_RS08725
• Genome accession: NZ_CP129879
• Coordinates: 1853215..1855719 (-)
• Length: 834 a.a.
• NCBI ID: WP_058205171.1
• Uniprot ID: -
• Organism: Lactococcus lactis subsp. lactis strain CAB701
• Function: homologous recombination (predicted from homology) Homologous recombination

Genomic Context

Location: 1848215..1860719

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
QZH48_RS08700 (QZH48_08700)	-	1849389..1850072 (+)	684	WP_038601744.1	lactate utilization protein C	-
QZH48_RS08705 (QZH48_08705)	-	1850147..1850860 (-)	714	WP_081043194.1	Bax inhibitor-1/YccA family protein	-
QZH48_RS08710 (QZH48_08710)	-	1850977..1851888 (-)	912	WP_301675617.1	diacylglycerol kinase family protein	-
QZH48_RS08715 (QZH48_08715)	-	1852045..1852557 (-)	513	WP_003132795.1	HD domain-containing protein	-
QZH48_RS08720 (QZH48_08720)	rpsT	1852889..1853122 (+)	234	WP_038601748.1	30S ribosomal protein S20	-
QZH48_RS08725 (QZH48_08725)	recD/recD2/recDB	1853215..1855719 (-)	2505	WP_058205171.1	ATP-dependent RecD-like DNA helicase	Machinery gene
QZH48_RS08730 (QZH48_08730)	-	1855716..1856309 (-)	594	WP_029344268.1	histidine phosphatase family protein	-
QZH48_RS08735 (QZH48_08735)	pheA	1856312..1857151 (-)	840	WP_270224577.1	prephenate dehydratase	-
QZH48_RS08740 (QZH48_08740)	-	1857153..1857641 (-)	489	WP_038601758.1	shikimate kinase	-
QZH48_RS08745 (QZH48_08745)	aroA	1857665..1858957 (-)	1293	WP_038601761.1	3-phosphoshikimate 1-carboxyvinyltransferase	-
QZH48_RS08750 (QZH48_08750)	-	1859078..1860142 (-)	1065	WP_058205175.1	prephenate dehydrogenase	-

Sequence

Protein

• Length: 834 a.a.
• Molecular weight: 92973.39 Da
• Isoelectric Point: 4.5229

>NTDB_id=781209 QZH48_RS08725 WP_058205171.1 1853215..1855719(-) (recD/recD2/recDB) [Lactococcus lactis subsp. lactis strain CAB701]
MIEKTYFTGSIEAIFFSNPSNFYKVLLIEIDETNAEYDDFEIVVNGTIGDVVEGDSYTFYGQLTQHPKYGEQLQVSQYEK
AVPTSGAGLVKYFSSDKFPGIGKKTAEKIVETFPENTVDSILEAPEKLDGLLTLARKNSFIKRLRENHGMEKVLTKLAEY
GLPSKITFQIYELYKEETIEKIEENPYQLVEDVKGVGFKTADKIASSLGIEADSPNRFRAALMHEVNTHSQSTGDTYIEA
KNLLEMTIDLLEEARNVEVNPSAVAEEINGLIVDGKVQQEGTKIFENSLYFAEDGIRKSLTALTNRSGKDFADEKLLTVL
AEVEKDLEITYDDLQKQAIIGAMNQQFFILTGGPGTGKTTIINGFIETYARLHQLDLDPDHYNDDVFPILLAAPTGRASR
RMNELTGLPAATIHRHLGLGQDEAEDALGNELSGALLIVDEFSMVDTWLANKLFQAIPGSMKVLLVGDADQLPSVGPGQI
FADLLKIPEIPSVKLDKIFRQGDDSTITDLAHHIKDGQLPSDFTAKKPDRSYFEVSANFVPQMVEQIASAWQKRGNNPFE
LQILAPMYKGMAGINAMNVLLQNLFNPLNDRLEFALGDMKFREGDKVLHLVNDAEANVFNGDLGQIVELIAAKYTDSKQD
ELVMDFDGQELTYPRAEWYKITLAYAMSIHKSQGSEFSTVIVPMVSSYSRMLERNLLYTAITRAKQSLILLGEERAFAQA
VAREGANRKTYLIERFMGENPAAKNLSVEIVSEKVTDKKERSNKEKKLATPVELQGQNHSVSKKMPAKVEEISLFEDEEI
ETLDQGSLTEALILSGNFDPLIGLTQQDFAIFNK

Nucleotide

• Length: 2505 bp

>NTDB_id=781209 QZH48_RS08725 WP_058205171.1 1853215..1855719(-) (recD/recD2/recDB) [Lactococcus lactis subsp. lactis strain CAB701]
ATGATTGAAAAAACTTATTTTACTGGTTCGATTGAGGCAATATTTTTCTCCAATCCCAGTAATTTTTATAAAGTTCTACT
CATTGAAATTGATGAAACTAATGCTGAATATGATGATTTTGAAATTGTGGTTAACGGAACAATTGGAGATGTGGTTGAAG
GAGATTCTTATACATTTTATGGTCAATTGACGCAGCATCCTAAGTATGGGGAACAATTACAGGTCAGTCAATATGAAAAA
GCAGTGCCGACTTCTGGTGCTGGTTTAGTTAAATATTTTTCTTCAGATAAATTTCCTGGAATTGGTAAGAAAACGGCAGA
AAAAATTGTTGAAACTTTTCCTGAAAATACGGTAGATTCAATTTTAGAAGCGCCGGAAAAATTGGATGGTCTATTGACCC
TAGCCAGAAAAAATTCATTTATTAAACGATTACGTGAGAACCATGGAATGGAAAAAGTGCTGACCAAGCTTGCAGAATAC
GGCTTACCAAGCAAAATCACTTTTCAAATTTATGAACTTTATAAAGAAGAAACGATTGAAAAAATTGAGGAAAATCCTTA
TCAACTTGTGGAAGATGTTAAGGGAGTTGGTTTTAAAACAGCTGATAAGATTGCAAGTAGTTTAGGAATTGAAGCGGATA
GCCCTAATCGATTTCGAGCGGCATTGATGCATGAGGTCAATACGCATTCGCAATCAACAGGTGATACTTACATTGAAGCC
AAAAATTTACTTGAGATGACGATAGATTTACTTGAAGAAGCTCGTAATGTCGAGGTCAATCCGTCTGCTGTTGCGGAGGA
AATTAATGGTTTAATTGTTGATGGAAAAGTGCAACAAGAAGGAACAAAAATATTTGAGAATTCTTTGTACTTTGCTGAGG
ACGGGATTCGGAAATCACTGACAGCATTAACTAATCGTTCTGGTAAAGATTTTGCTGATGAAAAGTTACTGACAGTTTTG
GCTGAAGTTGAAAAAGATTTAGAAATTACTTATGATGATTTGCAAAAGCAAGCCATTATTGGTGCAATGAATCAGCAATT
TTTCATTTTGACTGGTGGACCAGGAACTGGTAAAACAACAATTATTAATGGTTTTATTGAAACTTATGCCCGTCTTCACC
AGCTAGATTTGGACCCAGACCATTATAATGATGATGTCTTTCCTATATTACTGGCAGCACCGACTGGTCGGGCTTCAAGA
CGGATGAATGAGTTGACTGGTCTTCCAGCAGCAACGATTCACCGCCATTTGGGTTTGGGACAAGATGAAGCAGAAGATGC
TCTTGGAAATGAATTGTCTGGTGCTCTTTTGATTGTTGACGAATTTTCTATGGTTGATACTTGGTTAGCTAATAAACTTT
TTCAAGCGATTCCTGGTTCAATGAAAGTTCTCCTTGTTGGAGATGCTGACCAGCTTCCTTCTGTGGGGCCAGGACAAATT
TTTGCGGATTTACTAAAAATTCCAGAAATTCCGTCAGTAAAATTGGATAAAATTTTTCGTCAAGGGGATGATTCTACCAT
TACTGATTTAGCTCACCATATCAAAGATGGGCAATTGCCAAGTGATTTCACGGCGAAAAAGCCTGACCGTTCATATTTTG
AGGTCAGTGCTAATTTTGTTCCTCAGATGGTTGAACAAATCGCAAGTGCATGGCAAAAAAGAGGGAATAATCCTTTTGAA
TTACAGATCTTAGCGCCTATGTATAAAGGAATGGCCGGAATTAATGCAATGAATGTTCTTTTACAAAATCTCTTTAACCC
ACTTAATGACCGACTTGAATTCGCTTTGGGTGATATGAAATTTCGTGAAGGAGATAAAGTTCTTCATTTAGTAAATGATG
CTGAGGCCAATGTATTTAACGGAGATTTGGGACAAATCGTAGAATTGATTGCAGCAAAATATACTGACAGTAAACAAGAT
GAGTTGGTGATGGATTTTGATGGTCAAGAATTGACTTATCCAAGAGCGGAGTGGTATAAAATTACTCTGGCTTATGCTAT
GTCCATTCATAAATCTCAAGGTTCAGAGTTTTCCACAGTTATTGTGCCGATGGTTTCTTCGTATTCACGCATGTTAGAGC
GAAATTTGCTTTATACGGCAATTACAAGGGCTAAACAAAGTCTGATTTTACTTGGTGAAGAACGAGCTTTTGCACAAGCG
GTGGCGCGTGAAGGGGCGAATCGAAAGACCTATCTGATCGAGCGATTTATGGGAGAAAACCCAGCGGCTAAAAATCTGTC
AGTAGAAATTGTGAGTGAAAAAGTTACTGACAAAAAAGAAAGATCTAACAAAGAGAAGAAGCTTGCAACGCCAGTAGAAT
TACAAGGGCAAAATCATTCTGTCAGTAAAAAAATGCCAGCAAAAGTAGAAGAAATTTCTTTATTTGAAGATGAAGAAATT
GAAACACTGGATCAGGGAAGCTTGACAGAAGCACTTATTTTGTCAGGAAATTTTGACCCTTTAATTGGTTTAACTCAACA
AGACTTTGCAATCTTTAATAAATAA

Domains

Predicted by InterProScan.

• ATP-dependent RecD-like DNA helicase SH3 domain (SH3_13) (577-646)

• AAA domain (AAA_30) (331-522)

• UvrD-like helicase C-terminal domain (UvrD_C_2) (664-710)

• Helix-hairpin-helix containing domain (HHH_RecD2) (146-237)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
recD/recD2/recDB	Bacillus subtilis subsp. subtilis str. 168	42.175	90.408	0.381