Detailed information    

insolico Bioinformatically predicted

Overview

Name   eeP   Type   Regulator
Locus tag   PML98_RS08420 Genome accession   NZ_CP116581
Coordinates   1846369..1847637 (-) Length   422 a.a.
NCBI ID   WP_005875929.1    Uniprot ID   -
Organism   Enterococcus durans strain R59-1     
Function   processing of ComS (predicted from homology)   
Competence regulation

Genomic Context

Location: 1841369..1852637
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  PML98_RS08415 (PML98_08415) - 1844598..1846301 (-) 1704 WP_193809147.1 proline--tRNA ligase -
  PML98_RS08420 (PML98_08420) eeP 1846369..1847637 (-) 1269 WP_005875929.1 RIP metalloprotease RseP Regulator
  PML98_RS08425 (PML98_08425) - 1847884..1848684 (-) 801 WP_005875931.1 phosphatidate cytidylyltransferase -
  PML98_RS08430 (PML98_08430) - 1848681..1849490 (-) 810 WP_113845798.1 isoprenyl transferase -
  PML98_RS08435 (PML98_08435) frr 1849833..1850390 (-) 558 WP_005875935.1 ribosome recycling factor -
  PML98_RS08440 (PML98_08440) pyrH 1850393..1851115 (-) 723 WP_005875937.1 UMP kinase -
  PML98_RS08445 (PML98_08445) tsf 1851337..1852218 (-) 882 WP_081134988.1 translation elongation factor Ts -

Sequence

Protein


Download         Length: 422 a.a.        Molecular weight: 45924.40 Da        Isoelectric Point: 5.0165

>NTDB_id=778585 PML98_RS08420 WP_005875929.1 1846369..1847637(-) (eeP) [Enterococcus durans strain R59-1]
MKTIITFIIVFGILVIVHEFGHFFFAKRSGILVREFAIGMGPKIYGHQAKDGTTYTLRLLPIGGYVRMAGNGDDETEMAP
GMPLSLLLNSDGIVEKINVSKKVQLPNGIPLELIAYDLEDDLTITGYVNGDETQEVTYHVEHDASIIEADGTEIRIAPRD
VQFQSAKLWQRMLTNFAGPMNNFILAILLFIILAFMQGGVQVTDTNQIGKVLPNGAAAAAGLKENDEIVSIDGKSVHSWN
DLTSEITENPGKKLDVEVRRDGKTQQLDVTPKAVEANGKEVGQLGIQAPMKTGFLDKIVGGARRAFSSSMEIFKALGSLF
TGFSLDKLGGPVMMFQLSSEAANQGVMTVISLMALLSMNLGIVNLLPIPALDGGKIVLNIFEGVRGKPLSQEKEGFITLA
GFGLLMLLMVLVTWNDIQRFFF

Nucleotide


Download         Length: 1269 bp        

>NTDB_id=778585 PML98_RS08420 WP_005875929.1 1846369..1847637(-) (eeP) [Enterococcus durans strain R59-1]
ATGAAAACAATTATCACATTTATTATTGTCTTCGGTATTTTGGTCATTGTACATGAGTTTGGACATTTCTTCTTTGCGAA
ACGATCAGGAATTCTCGTTCGTGAGTTTGCTATTGGAATGGGTCCGAAAATCTATGGACACCAAGCAAAGGACGGAACTA
CCTATACATTGCGTTTATTGCCGATCGGCGGTTATGTGAGAATGGCAGGAAACGGAGACGATGAAACAGAAATGGCCCCT
GGAATGCCGTTATCTCTTTTGTTAAATTCTGATGGTATCGTGGAGAAAATCAATGTAAGCAAAAAAGTGCAACTGCCCAA
TGGGATTCCATTAGAATTGATCGCATACGATCTTGAAGACGACTTAACGATCACAGGTTATGTGAATGGAGATGAAACAC
AGGAAGTCACCTATCACGTCGAACACGATGCTTCCATCATTGAAGCGGACGGTACAGAGATCCGAATTGCGCCTAGAGAT
GTTCAATTCCAGTCAGCGAAATTATGGCAACGGATGCTGACTAATTTCGCTGGGCCGATGAATAATTTTATTTTAGCGAT
CCTGTTGTTCATTATCCTTGCGTTCATGCAAGGTGGCGTGCAAGTAACGGATACCAATCAAATTGGAAAAGTCTTGCCGA
ATGGCGCAGCCGCAGCTGCTGGGTTGAAAGAAAATGATGAAATAGTATCGATTGATGGCAAGTCTGTTCATTCATGGAAC
GATTTGACGTCAGAGATCACCGAAAATCCTGGGAAAAAATTAGATGTTGAAGTAAGACGTGACGGCAAAACACAGCAGCT
TGACGTAACACCGAAAGCAGTTGAAGCCAATGGGAAAGAAGTCGGCCAACTAGGGATTCAAGCACCAATGAAGACTGGCT
TTTTGGATAAAATAGTTGGTGGAGCCCGTCGAGCATTCAGTAGTTCAATGGAGATATTCAAAGCGTTAGGCTCATTGTTC
ACAGGCTTTAGCTTAGATAAATTAGGTGGACCCGTGATGATGTTCCAGCTTTCTTCTGAAGCTGCTAATCAAGGTGTGAT
GACTGTCATTAGCTTGATGGCCCTGCTTTCTATGAATCTAGGAATCGTTAATTTACTGCCGATTCCTGCATTAGATGGTG
GGAAAATCGTCTTGAACATCTTTGAAGGTGTGAGAGGAAAACCTCTCAGTCAAGAAAAAGAAGGCTTTATCACTTTGGCA
GGATTTGGGTTATTGATGCTATTGATGGTATTGGTCACTTGGAATGATATTCAACGATTCTTTTTCTAA

Domains

Predicted by InterproScan.

Peptidase family M50 (Peptidase_M50)

(6-408)

PDZ domain (PDZ_2)

(199-270)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  eeP Streptococcus thermophilus LMD-9

55.607

100

0.564
  eeP Streptococcus thermophilus LMG 18311

55.374

100

0.562