Detailed information    

insolico Bioinformatically predicted

Overview


Name   sepM   Type   Regulator
Locus tag   QTN46_RS07815 Genome accession   NZ_CP128501
Coordinates   1446951..1447973 (+) Length   340 a.a.
NCBI ID   WP_013352157.1    Uniprot ID   A0A9P1JGM5
Organism   Bacillus amyloliquefaciens strain SRCM123386     
Function   processing of CSP (predicted from homology)   
Competence regulation

Genomic Context


Location: 1441951..1452973
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  QTN46_RS07780 (QTN46_07780) - 1442313..1442552 (+) 240 WP_003154475.1 YlbE-like family protein -
  QTN46_RS07785 (QTN46_07785) ylbF 1442624..1443073 (+) 450 WP_013352152.1 YlbF family regulator Regulator
  QTN46_RS07790 (QTN46_07790) - 1443132..1443404 (+) 273 WP_013352153.1 YlbG family protein -
  QTN46_RS07795 (QTN46_07795) rsmD 1443703..1444257 (+) 555 WP_007409693.1 16S rRNA (guanine(966)-N(2))-methyltransferase RsmD -
  QTN46_RS07800 (QTN46_07800) coaD 1444262..1444744 (+) 483 WP_013352154.1 pantetheine-phosphate adenylyltransferase -
  QTN46_RS07805 (QTN46_07805) ylbJ 1444762..1445988 (-) 1227 WP_014472570.1 sporulation integral membrane protein YlbJ -
  QTN46_RS07810 (QTN46_07810) - 1446166..1446945 (+) 780 WP_013352156.1 patatin-like phospholipase family protein -
  QTN46_RS07815 (QTN46_07815) sepM 1446951..1447973 (+) 1023 WP_013352157.1 SepM family pheromone-processing serine protease Regulator
  QTN46_RS07820 (QTN46_07820) - 1447994..1449241 (-) 1248 WP_013352158.1 nucleotidyltransferase -
  QTN46_RS07825 (QTN46_07825) - 1449449..1449967 (+) 519 WP_013352159.1 DUF177 domain-containing protein -
  QTN46_RS07830 (QTN46_07830) rpmF 1449989..1450168 (+) 180 WP_003154457.1 50S ribosomal protein L32 -
  QTN46_RS07835 (QTN46_07835) gerR 1450325..1450900 (+) 576 WP_013352160.1 sporulation-specific transcriptional regulator GerR -
  QTN46_RS07840 (QTN46_07840) - 1450941..1451423 (-) 483 WP_013352161.1 N-acetyltransferase -
  QTN46_RS07845 (QTN46_07845) - 1451586..1452467 (+) 882 WP_061573876.1 2-dehydropantoate 2-reductase -

Sequence


Protein


Download         Length: 340 a.a.        Molecular weight: 37480.23 Da        Isoelectric Point: 9.5435

>NTDB_id=774016 QTN46_RS07815 WP_013352157.1 1446951..1447973(+) (sepM) [Bacillus amyloliquefaciens strain SRCM123386]
MKAKHFRWVFIILILLIAITFIKLPYYITQPGEASELRPLIKVDGGYPEKGSLSLMTVKVGPANPYTYLWAKVHPYDEIV
PDESIKEEGETDSDYMKRQLQMMKSSQENAVIAAYQKAGKQVKYSFNGIYASSVVSNMPAKGKIKVGDKIISADGKKYES
AEKLIDYISSKKAGEKVTFNIERDTKEKTVTLKLKSFPDDPKRAGIGVALYTDRNVKVKPDLHFSIENIGGPSAGLMMSL
EIYNQLTKPDETKGYNIAGTGTIDVDGKVGPIGGIDQKVVAADKAGKDIFFAPNQNGAENSDYKNAVKTAKAIKSDMKIV
PVDTMQDALDYLDKLKVKST

Nucleotide


Download         Length: 1023 bp        

>NTDB_id=774016 QTN46_RS07815 WP_013352157.1 1446951..1447973(+) (sepM) [Bacillus amyloliquefaciens strain SRCM123386]
ATGAAAGCAAAACATTTTCGCTGGGTGTTTATCATCCTGATCTTATTAATCGCTATTACATTTATTAAGCTTCCGTATTA
CATTACACAGCCGGGAGAAGCATCAGAGCTGAGACCGCTGATTAAGGTGGACGGAGGCTACCCTGAAAAAGGAAGCCTTT
CCTTGATGACTGTCAAAGTAGGCCCCGCCAATCCGTATACATATCTTTGGGCGAAGGTGCATCCTTACGATGAAATCGTC
CCTGATGAAAGCATAAAAGAAGAGGGCGAAACTGATTCAGACTATATGAAGCGCCAACTGCAGATGATGAAAAGCTCTCA
AGAAAACGCGGTCATTGCCGCTTATCAAAAAGCCGGCAAACAGGTAAAATACTCATTTAACGGCATTTACGCCAGCTCAG
TCGTCTCCAATATGCCGGCAAAAGGAAAAATAAAGGTCGGTGATAAAATCATCAGCGCGGACGGGAAAAAATATGAATCC
GCTGAAAAGCTGATTGATTATATCAGCAGCAAAAAAGCGGGAGAAAAAGTAACGTTTAACATTGAACGTGACACGAAAGA
AAAGACAGTTACCCTTAAGCTGAAATCATTCCCGGACGATCCGAAAAGAGCCGGAATCGGCGTAGCATTATATACGGACC
GGAACGTGAAAGTGAAGCCGGATCTTCATTTCAGTATTGAAAACATCGGCGGGCCTTCTGCCGGTCTCATGATGTCTTTG
GAAATTTACAATCAGCTGACAAAACCTGACGAAACAAAAGGCTACAATATAGCCGGAACGGGAACAATCGACGTTGACGG
CAAGGTCGGACCGATTGGCGGAATCGATCAGAAAGTCGTCGCCGCAGACAAAGCGGGAAAAGATATTTTCTTTGCGCCGA
ACCAAAACGGAGCTGAAAACTCTGATTATAAAAATGCAGTAAAAACGGCGAAAGCGATTAAGTCCGATATGAAAATCGTT
CCTGTCGATACGATGCAGGACGCACTTGATTATTTGGATAAGCTGAAAGTAAAAAGCACCTGA


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure
  AlphaFold DB A0A9P1JGM5

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  sepM Streptococcus mutans UA159

38.728

100

0.394