Detailed information
Bioinformatically predicted
Overview
| Name | ymcA | Type | Regulator |
| Locus tag | BSG8_RS08955 | Genome accession | NZ_AP025224 |
| Coordinates | 1692277..1692708 (+) | Length | 143 a.a. |
| NCBI ID | WP_003231834.1 | Uniprot ID | G4NVD0 |
| Organism | Bacillus subtilis subsp. natto strain G8 | ||
| Function | accelerate the production of Spo0A~P (predicted from homology) Competence regulation |
||
Genomic Context
Location: 1687277..1697708
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| BSG8_RS08935 (BSG8_17630) | spoVS | 1687839..1688099 (+) | 261 | WP_003154135.1 | stage V sporulation protein SpoVS | - |
| BSG8_RS08940 (BSG8_17640) | tdh | 1688364..1689407 (+) | 1044 | WP_014479818.1 | L-threonine 3-dehydrogenase | - |
| BSG8_RS08945 (BSG8_17650) | kbl | 1689420..1690598 (+) | 1179 | WP_014479819.1 | glycine C-acetyltransferase | - |
| BSG8_RS08950 (BSG8_17660) | miaB | 1690746..1692275 (+) | 1530 | WP_014479820.1 | tRNA (N6-isopentenyl adenosine(37)-C2)-methylthiotransferase MiaB | - |
| BSG8_RS08955 (BSG8_17670) | ymcA | 1692277..1692708 (+) | 432 | WP_003231834.1 | regulatory iron-sulfur-containing complex subunit RicA | Regulator |
| BSG8_RS08960 (BSG8_17690) | cotE | 1692970..1693515 (+) | 546 | WP_003231833.1 | outer spore coat protein CotE | - |
| BSG8_RS08965 (BSG8_17700) | hexA | 1693648..1696224 (+) | 2577 | WP_014479821.1 | DNA mismatch repair protein MutS | Machinery gene |
Sequence
Protein
Download Length: 143 a.a. Molecular weight: 16166.27 Da Isoelectric Point: 5.0437
>NTDB_id=77119 BSG8_RS08955 WP_003231834.1 1692277..1692708(+) (ymcA) [Bacillus subtilis subsp. natto strain G8]
MTLYSKKDIVQQARNLAKMISETEEVDFFKRAEAQINENDKVSTIVNQIKALQKQAVNLKHYEKHEALKQVEAKIDALQE
ELEEIPVIQEFRDSQMEVNDLLQLVAHTISNQVTNEIITSTGGDLLKGETGSKVKHSNNSCSL
MTLYSKKDIVQQARNLAKMISETEEVDFFKRAEAQINENDKVSTIVNQIKALQKQAVNLKHYEKHEALKQVEAKIDALQE
ELEEIPVIQEFRDSQMEVNDLLQLVAHTISNQVTNEIITSTGGDLLKGETGSKVKHSNNSCSL
Nucleotide
Download Length: 432 bp
>NTDB_id=77119 BSG8_RS08955 WP_003231834.1 1692277..1692708(+) (ymcA) [Bacillus subtilis subsp. natto strain G8]
ATGACGCTCTACTCAAAAAAAGACATTGTGCAGCAGGCACGAAACCTTGCAAAAATGATTTCTGAAACAGAAGAGGTTGA
TTTTTTCAAACGGGCTGAAGCGCAAATCAATGAGAATGACAAAGTGTCCACAATCGTTAATCAGATTAAAGCCCTGCAAA
AGCAGGCTGTCAATCTGAAGCATTATGAAAAGCATGAAGCGCTCAAACAAGTAGAAGCAAAAATTGACGCGCTGCAAGAA
GAGCTTGAAGAGATTCCTGTTATCCAGGAATTCAGAGACTCGCAGATGGAAGTAAATGACCTACTGCAGCTCGTTGCACA
CACCATTTCCAACCAAGTCACAAATGAAATCATCACATCAACCGGAGGCGACCTGCTGAAAGGGGAAACCGGTTCAAAGG
TGAAGCATTCAAATAACAGCTGTTCTCTCTAA
ATGACGCTCTACTCAAAAAAAGACATTGTGCAGCAGGCACGAAACCTTGCAAAAATGATTTCTGAAACAGAAGAGGTTGA
TTTTTTCAAACGGGCTGAAGCGCAAATCAATGAGAATGACAAAGTGTCCACAATCGTTAATCAGATTAAAGCCCTGCAAA
AGCAGGCTGTCAATCTGAAGCATTATGAAAAGCATGAAGCGCTCAAACAAGTAGAAGCAAAAATTGACGCGCTGCAAGAA
GAGCTTGAAGAGATTCCTGTTATCCAGGAATTCAGAGACTCGCAGATGGAAGTAAATGACCTACTGCAGCTCGTTGCACA
CACCATTTCCAACCAAGTCACAAATGAAATCATCACATCAACCGGAGGCGACCTGCTGAAAGGGGAAACCGGTTCAAAGG
TGAAGCATTCAAATAACAGCTGTTCTCTCTAA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| ymcA | Bacillus subtilis subsp. subtilis str. 168 |
100 |
100 |
1 |