Detailed information NTG0766901

Bioinformatically predicted

Overview

• Name: rapF
• Type: Regulator
• Locus tag: QNK06_RS01630
• Genome accession: NZ_CP126097
• Coordinates: 295080..296201 (+)
• Length: 373 a.a.
• NCBI ID: WP_015715201.1
• Uniprot ID: -
• Organism: Bacillus subtilis strain KF24
• Function: inhibit the DNA-binding function of ComA (predicted from homology) Competence regulation

Genomic Context

Location: 290080..301201

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
QNK06_RS01605 (QNK06_01605)	ycdA	290085..291149 (-)	1065	WP_003234750.1	DUF4352 domain-containing protein	-
QNK06_RS01610 (QNK06_01610)	-	291172..291303 (-)	132	WP_003246334.1	hypothetical protein	-
QNK06_RS01615 (QNK06_01615)	ycdB	291477..292898 (+)	1422	WP_283934024.1	YcdB/YcdC domain-containing protein	-
QNK06_RS01620 (QNK06_01620)	ycdC	293085..294446 (+)	1362	WP_169038021.1	YcdB/YcdC domain-containing protein	-
QNK06_RS01625 (QNK06_01625)	cwlK	294454..294957 (-)	504	WP_032724854.1	peptidoglycan L-alanyl-D-glutamate endopeptidase CwlK	-
QNK06_RS01630 (QNK06_01630)	rapF	295080..296201 (+)	1122	WP_015715201.1	response regulator aspartate phosphatase RapJ	Regulator
QNK06_RS01635 (QNK06_01635)	ycdF	296308..297084 (+)	777	WP_130573394.1	SDR family oxidoreductase	-
QNK06_RS01640 (QNK06_01640)	ycdG	297109..298794 (+)	1686	WP_283934025.1	alpha-glucosidase	-
QNK06_RS01645 (QNK06_01645)	znuA	298982..299941 (+)	960	WP_003234733.1	metal ABC transporter substrate-binding protein	-
QNK06_RS01650 (QNK06_01650)	znuC	299996..300691 (+)	696	WP_014475714.1	zinc ABC transporter ATP-binding protein ZnuC	-

Sequence

Protein

• Length: 373 a.a.
• Molecular weight: 44400.29 Da
• Isoelectric Point: 4.8344

>NTDB_id=766901 QNK06_RS01630 WP_015715201.1 295080..296201(+) (rapF) [Bacillus subtilis strain KF24]
MRAKIPSEEVAVKLNEWYKLIRAFEADQAEALKQEIEYDLEDMEENQDLLLYFSLMEFRHRIMLDKLMPVKDSDTKPPFS
DMLNEIESNQQKLTGLLEYYFYYFRGMYEFKQKNFILAIDHYKHAEEKLEYVEDEIEKAEFLFKVAEVYYHIKQTYFSMN
YASQALDIYTKYELYGRRRVQCEFIIAGNLTDVYHHEKALTHLCSALDHARQLEEAYMIAAAYYNVGHCKYSLGDYKEAE
GYFKTAAAIFEEHNFQQAVQAVFSLTHIYCKEGKYDKAVEAYDRGIKSAAEWEDDMYLTKFRLIHELYLGSGDLNVLTEC
FDLLESRQLLADAEDLLHDTAERFNQLEHYESAAFFYRRLMNIKKKLAEQRFQ

Nucleotide

• Length: 1122 bp

>NTDB_id=766901 QNK06_RS01630 WP_015715201.1 295080..296201(+) (rapF) [Bacillus subtilis strain KF24]
ATGAGAGCAAAGATTCCATCAGAAGAAGTAGCAGTAAAGCTGAATGAATGGTACAAGCTCATTCGCGCATTTGAAGCAGA
TCAAGCAGAAGCGTTAAAGCAGGAGATTGAATACGATTTAGAAGATATGGAAGAGAACCAGGACTTGCTTTTATATTTTT
CTTTGATGGAATTCCGGCATCGAATCATGCTTGATAAGCTGATGCCGGTGAAAGACAGCGACACCAAGCCTCCGTTCTCT
GATATGCTGAACGAAATTGAAAGCAATCAGCAAAAACTCACGGGCTTACTGGAATATTACTTTTATTATTTCAGAGGAAT
GTACGAATTCAAGCAGAAAAATTTCATATTAGCGATTGACCATTATAAACATGCCGAGGAAAAGCTCGAGTATGTCGAGG
ATGAGATCGAAAAAGCTGAGTTTCTTTTTAAAGTCGCAGAAGTGTATTATCACATCAAACAAACGTATTTTTCCATGAAT
TATGCGAGCCAGGCGCTTGATATCTATACGAAATATGAACTGTACGGTCGCCGCCGGGTTCAGTGTGAATTTATCATCGC
CGGAAATTTGACCGATGTGTATCATCATGAAAAAGCACTGACCCACTTGTGCAGCGCTTTAGATCATGCCAGGCAGCTTG
AAGAAGCGTACATGATCGCCGCTGCCTATTATAATGTCGGACACTGTAAGTACAGTCTGGGTGATTACAAAGAAGCGGAG
GGCTATTTCAAAACAGCCGCCGCCATTTTTGAGGAGCACAATTTTCAGCAAGCTGTTCAAGCTGTATTCTCACTGACCCA
TATCTACTGTAAAGAGGGAAAATACGACAAGGCAGTAGAGGCGTATGACCGCGGGATAAAGAGCGCGGCTGAATGGGAGG
ATGACATGTACTTGACGAAATTCCGCCTCATTCATGAGCTGTATCTTGGAAGCGGCGACCTGAACGTGCTTACAGAATGC
TTTGATCTGCTGGAATCCAGGCAGCTTCTTGCCGACGCCGAAGATCTGCTGCATGATACAGCGGAACGTTTCAATCAGCT
GGAACATTACGAGTCCGCCGCTTTCTTTTACCGCAGGCTGATGAATATTAAAAAGAAGCTTGCCGAGCAGCGTTTTCAAT
AG

Domains

Predicted by InterProScan.

• response regulator aspartate phosphatase H, N terminal (RapH_N) (4-65)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
rapF	Bacillus subtilis subsp. subtilis str. 168	42.391	98.66	0.418
rapC	Bacillus subtilis subsp. subtilis str. 168	41.257	98.123	0.405