Detailed information NTG0765020

Bioinformatically predicted

Overview

• Name: pilA
• Type: Machinery gene
• Locus tag: O1V13_RS24470
• Genome accession: NZ_CP114201
• Coordinates: 5393995..5395215 (+)
• Length: 406 a.a.
• NCBI ID: WP_269197358.1
• Uniprot ID: -
• Organism: Delftia acidovorans strain BIM B-1761
• Function: assembly of type IV pilus (predicted from homology) DNA binding and uptake

Genomic Context

Location: 5388995..5400215

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
O1V13_RS24450 (O1V13_24460)	coaD	5389761..5390261 (-)	501	WP_013803934.1	pantetheine-phosphate adenylyltransferase	-
O1V13_RS24455 (O1V13_24465)	rsmD	5390393..5391103 (-)	711	WP_012203729.1	16S rRNA (guanine(966)-N(2))-methyltransferase RsmD	-
O1V13_RS24460 (O1V13_24470)	-	5391100..5392461 (-)	1362	WP_013803935.1	M16 family metallopeptidase	-
O1V13_RS24465 (O1V13_24475)	-	5392488..5393966 (-)	1479	WP_013803936.1	M16 family metallopeptidase	-
O1V13_RS24470 (O1V13_24480)	pilA	5393995..5395215 (+)	1221	WP_269197358.1	signal recognition particle-docking protein FtsY	Machinery gene
O1V13_RS24475 (O1V13_24485)	-	5396163..5396900 (+)	738	WP_269197359.1	GntR family transcriptional regulator	-
O1V13_RS24480 (O1V13_24490)	-	5397245..5398372 (+)	1128	WP_269197360.1	hypothetical protein	-
O1V13_RS24485 (O1V13_24495)	-	5398383..5399354 (+)	972	WP_269197361.1	hypothetical protein	-

Sequence

Protein

• Length: 406 a.a.
• Molecular weight: 42502.40 Da
• Isoelectric Point: 5.7832

>NTDB_id=765020 O1V13_RS24470 WP_269197358.1 5393995..5395215(+) (pilA) [Delftia acidovorans strain BIM B-1761]
MFSFFKKKPTPSAAEISPTDSSAAPEKAGIPATPPQDSPPALPPAAPAAPASDTGSAWWRKPFGGGKGDAAPPETPPAPA
AAPASTIAPADFIAAPEPTAKPETEGASRQNWMQRLKTGLRKTGSSIATVFTGTQINDALYEELEDALLMADTGVKATEH
LLADLRRRVKEAKATDPAAVKALLADALADLLRPLEKPLVIGEHQPTVIMVAGVNGAGKTTSIGKLTRHLADEGQSVLLA
AADTFRAAAREQLGVWANRNTVEIVSQEGGDPAAVSFDAVTAGRARKKDVVLVDTAGRLPTQLHLMEELRKIRRVVSKAD
ATAPHEVLLVIDGNTGQNALAQVRAFDDALQLTGLIVTKLDGTAKGGVLAAIAQERPIPVYFIGVGEKVEDLETFNAREF
AQALLS

Nucleotide

• Length: 1221 bp

>NTDB_id=765020 O1V13_RS24470 WP_269197358.1 5393995..5395215(+) (pilA) [Delftia acidovorans strain BIM B-1761]
ATGTTCAGTTTTTTCAAGAAAAAGCCCACCCCCTCCGCCGCCGAGATTTCCCCGACGGACAGCAGCGCCGCGCCTGAAAA
GGCCGGCATTCCCGCAACCCCACCGCAGGACAGCCCCCCTGCCCTGCCACCGGCCGCACCAGCAGCGCCGGCCTCCGACA
CCGGCAGTGCCTGGTGGCGCAAGCCCTTTGGCGGCGGCAAGGGCGATGCCGCGCCCCCCGAGACTCCGCCTGCCCCAGCT
GCGGCACCCGCGTCCACCATCGCGCCTGCGGACTTCATTGCCGCGCCCGAGCCCACGGCCAAGCCCGAGACCGAGGGTGC
CAGCCGCCAGAACTGGATGCAGCGCCTCAAGACCGGCCTGCGCAAGACCGGCAGCAGCATTGCCACGGTCTTCACGGGCA
CGCAGATCAACGATGCGCTGTACGAGGAACTGGAAGACGCCCTGCTGATGGCCGACACCGGCGTCAAGGCCACCGAGCAC
CTGCTCGCCGACCTGCGCCGCCGCGTCAAGGAGGCCAAGGCCACCGACCCCGCCGCCGTCAAGGCGCTGCTGGCCGATGC
CCTGGCCGACCTGCTGCGCCCGCTGGAAAAGCCGCTGGTCATCGGCGAGCACCAGCCCACCGTGATCATGGTGGCTGGCG
TCAACGGCGCGGGCAAGACCACCTCCATCGGCAAGCTGACCCGTCACCTGGCCGATGAAGGCCAGAGCGTGCTGCTGGCC
GCCGCCGACACCTTCCGCGCCGCCGCGCGCGAGCAGCTTGGCGTCTGGGCCAACCGCAACACGGTGGAGATCGTCAGCCA
GGAAGGGGGCGATCCTGCGGCCGTGAGCTTTGACGCCGTCACCGCCGGCCGCGCGCGCAAGAAGGATGTGGTGCTGGTGG
ACACGGCAGGCCGCCTGCCCACCCAGCTGCACCTGATGGAAGAGCTGCGCAAGATCCGCCGCGTGGTCAGCAAGGCCGAC
GCCACGGCACCGCACGAGGTGCTGCTGGTCATCGACGGCAACACCGGCCAGAACGCGCTGGCCCAGGTGCGCGCCTTTGA
CGATGCGCTGCAGCTCACGGGCCTGATCGTCACCAAGCTCGACGGCACAGCCAAGGGCGGCGTGCTGGCTGCCATTGCCC
AGGAACGGCCGATCCCCGTGTACTTCATCGGCGTGGGCGAAAAGGTCGAGGACCTGGAAACCTTCAACGCCCGGGAATTC
GCGCAGGCGCTGCTGTCCTGA

Domains

Predicted by InterproScan.

• SRP54-type protein, GTPase domain (SRP54) (206-405)

• SRP54-type protein, helical bundle domain (SRP54_N) (125-188)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
pilA	Neisseria gonorrhoeae MS11	49.052	100	0.51