Detailed information NTG0762990

Bioinformatically predicted

Overview

• Name: waaF
• Type: Regulator
• Locus tag: QMK09_RS06080
• Genome accession: NZ_CP125383
• Coordinates: 1156187..1157146 (+)
• Length: 319 a.a.
• NCBI ID: WP_002875425.1
• Uniprot ID: Q0P9A8
• Organism: Campylobacter jejuni strain SKBC1
• Function: repress natural transformation (predicted from homology) Competence regulation

Genomic Context

Location: 1151187..1162146

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
QMK09_RS06060 (QMK09_06060)	neuC	1151752..1152867 (+)	1116	WP_002858400.1	UDP-N-acetylglucosamine 2-epimerase	-
QMK09_RS09445	-	1152864..1153778 (+)	915	Protein_1180	beta-1,4-N-acetylgalactosaminyltransferase	-
QMK09_RS09450	-	1153812..1154474 (+)	663	WP_032596875.1	acylneuraminate cytidylyltransferase	-
QMK09_RS06070 (QMK09_06070)	-	1154469..1155320 (-)	852	WP_032114306.1	glycosyltransferase	-
QMK09_RS06075 (QMK09_06075)	waaV	1155304..1156128 (-)	825	WP_002858096.1	glycosyltransferase family 2 protein	-
QMK09_RS06080 (QMK09_06080)	waaF	1156187..1157146 (+)	960	WP_002875425.1	lipopolysaccharide heptosyltransferase II	Regulator
QMK09_RS06085 (QMK09_06085)	gmhA	1157127..1157687 (-)	561	WP_002875424.1	D-sedoheptulose 7-phosphate isomerase	-
QMK09_RS06090 (QMK09_06090)	rfaE1	1157684..1159069 (-)	1386	WP_002858114.1	D-glycero-beta-D-manno-heptose-7-phosphate kinase	-
QMK09_RS06095 (QMK09_06095)	rfaD	1159062..1160015 (-)	954	WP_052794327.1	ADP-glyceromanno-heptose 6-epimerase	-
QMK09_RS06100 (QMK09_06100)	gmhB	1160012..1160576 (-)	565	Protein_1188	D-glycero-alpha-D-manno-heptose-1,7-bisphosphate 7-phosphatase	-
QMK09_RS06105 (QMK09_06105)	-	1160657..1160959 (+)	303	WP_002852762.1	cytochrome c	-
QMK09_RS06110 (QMK09_06110)	ccoS	1160982..1161188 (-)	207	WP_002852798.1	cbb3-type cytochrome oxidase assembly protein CcoS	-

Sequence

Protein

• Length: 319 a.a.
• Molecular weight: 36734.30 Da
• Isoelectric Point: 10.2412

>NTDB_id=762990 QMK09_RS06080 WP_002875425.1 1156187..1157146(+) (waaF) [Campylobacter jejuni strain SKBC1]
MKIFIHLPTWLGDTVMASPALYTIKEHFKDAQFILYGSFVSTALFKEFPNSKIIIENKLSRYKQALSLRKELGKIDLSFA
FRSAFSSKIILHILKTKQRYFFDKNKYKEEHQVLKYLYFIENSLSIKAHFKDLKLPFKLKFQNPLILRNGKKILGLNPGA
SFGSAKRWDASYFAKVALNFSQSHDILIFGAGKAEQELCNEIYQILKEQNIKVKNLCNKTTIKTLCQNIAFCDLFITNDS
GPMHLSAVYKVKTVAIFGPTKFTQTSPWQNENAKLVHLDLACMPCMQKTCPLKHHKCMKDLKPEKVIEQAKNLLKNSHL

Nucleotide

• Length: 960 bp

>NTDB_id=762990 QMK09_RS06080 WP_002875425.1 1156187..1157146(+) (waaF) [Campylobacter jejuni strain SKBC1]
ATGAAAATTTTTATACATCTTCCCACCTGGTTAGGCGATACGGTAATGGCTTCACCTGCTTTATACACTATAAAAGAACA
TTTTAAAGATGCTCAGTTTATCCTTTATGGTTCTTTTGTTTCTACAGCACTTTTTAAAGAATTTCCTAATTCTAAAATCA
TCATAGAAAATAAACTATCCCGTTATAAACAAGCTCTATCTTTACGCAAAGAACTTGGTAAAATCGATCTTAGCTTTGCT
TTTAGATCTGCGTTCTCTTCTAAGATTATCTTGCATATCCTTAAAACAAAACAAAGATATTTTTTTGACAAAAACAAGTA
CAAAGAAGAACATCAAGTTTTAAAATACCTTTATTTTATAGAAAATTCACTTAGTATAAAAGCTCATTTTAAGGACTTAA
AGCTTCCCTTTAAGCTAAAATTTCAAAACCCTCTTATCTTAAGAAATGGTAAAAAAATTCTAGGACTCAACCCTGGTGCA
AGCTTTGGAAGTGCAAAAAGATGGGATGCGAGTTATTTTGCTAAAGTGGCTTTAAATTTCAGCCAAAGTCATGATATTTT
AATCTTTGGTGCAGGAAAAGCCGAACAAGAACTTTGTAATGAAATTTATCAAATTTTAAAAGAACAAAACATAAAAGTAA
AAAATCTTTGCAATAAAACCACCATCAAAACCCTTTGTCAAAATATCGCTTTTTGCGATCTTTTCATCACAAATGACAGT
GGACCTATGCACCTAAGTGCGGTTTATAAGGTAAAAACCGTAGCTATTTTTGGCCCTACGAAATTTACTCAAACTTCACC
TTGGCAAAATGAAAATGCAAAATTAGTGCATTTAGATCTAGCTTGTATGCCTTGTATGCAAAAAACCTGCCCTTTAAAAC
ACCACAAATGCATGAAAGATCTAAAGCCTGAAAAAGTGATAGAACAGGCTAAAAATTTACTTAAAAACTCTCATCTATGA

Domains

Predicted by InterProScan.

• Glycosyltransferase family 9 (heptosyltransferase) (Glyco_transf_9) (94-294)

3D structure

• AlphaFold DB: Q0P9A8

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
waaF	Campylobacter jejuni subsp. jejuni NCTC 11168 = ATCC 700819	100	100	1