Detailed information
Bioinformatically predicted
Overview
| Name | pilN | Type | Machinery gene |
| Locus tag | M2Z51_RS01430 | Genome accession | NZ_AP024967 |
| Coordinates | 312350..312934 (+) | Length | 194 a.a. |
| NCBI ID | WP_000902746.1 | Uniprot ID | - |
| Organism | Vibrio cholerae strain V130003 | ||
| Function | assembly of type IV pilus (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 307350..317934
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| M2Z51_RS01415 (V130003_02770) | oxyR | 307755..308648 (+) | 894 | WP_001025909.1 | DNA-binding transcriptional regulator OxyR | - |
| M2Z51_RS01420 (V130003_02780) | - | 308724..311201 (-) | 2478 | WP_032477106.1 | penicillin-binding protein 1A | - |
| M2Z51_RS01425 (V130003_02790) | pilM | 311344..312360 (+) | 1017 | WP_000520444.1 | type IV pilus assembly protein PilM | Machinery gene |
| M2Z51_RS01430 (V130003_02800) | pilN | 312350..312934 (+) | 585 | WP_000902746.1 | PilN domain-containing protein | Machinery gene |
| M2Z51_RS01435 (V130003_02810) | pilO | 312927..313517 (+) | 591 | WP_000157690.1 | type 4a pilus biogenesis protein PilO | Machinery gene |
| M2Z51_RS01440 (V130003_02820) | pilP | 313507..314025 (+) | 519 | WP_000792033.1 | pilus assembly protein PilP | Machinery gene |
| M2Z51_RS01445 (V130003_02830) | pilQ | 314051..315766 (+) | 1716 | WP_000788426.1 | type IV pilus secretin PilQ family protein | Machinery gene |
| M2Z51_RS01450 (V130003_02840) | aroK | 315953..316477 (+) | 525 | WP_000818616.1 | shikimate kinase AroK | - |
| M2Z51_RS01455 (V130003_02850) | aroB | 316505..317590 (+) | 1086 | WP_248532061.1 | 3-dehydroquinate synthase | - |
Sequence
Protein
Download Length: 194 a.a. Molecular weight: 22022.45 Da Isoelectric Point: 9.7294
>NTDB_id=76295 M2Z51_RS01430 WP_000902746.1 312350..312934(+) (pilN) [Vibrio cholerae strain V130003]
MLHKVNLLPWRDARREAHKRRFLGLVTLGVLLAVLMQFAAGEYLGGQMALQQERIGYLQQHIFSLDQQIAKLKIAEEEHK
ALLTRLTVVEQLQQKRNKTTEFMNQMPNLIPEGVYVDKIKMNGHQIEITGISDSTARLATMLDNLEKSDKLTDVEMHEIV
SGNKRFGKQFQSFKVSFQILTPASNPQEGGAHNG
MLHKVNLLPWRDARREAHKRRFLGLVTLGVLLAVLMQFAAGEYLGGQMALQQERIGYLQQHIFSLDQQIAKLKIAEEEHK
ALLTRLTVVEQLQQKRNKTTEFMNQMPNLIPEGVYVDKIKMNGHQIEITGISDSTARLATMLDNLEKSDKLTDVEMHEIV
SGNKRFGKQFQSFKVSFQILTPASNPQEGGAHNG
Nucleotide
Download Length: 585 bp
>NTDB_id=76295 M2Z51_RS01430 WP_000902746.1 312350..312934(+) (pilN) [Vibrio cholerae strain V130003]
ATGTTGCATAAGGTCAACTTACTGCCGTGGCGTGATGCACGGCGTGAAGCACATAAGCGGCGCTTTTTGGGGTTAGTGAC
ACTCGGTGTTTTACTGGCGGTGTTGATGCAATTTGCCGCAGGCGAATACTTGGGCGGACAAATGGCTTTGCAGCAAGAGC
GGATTGGTTATTTGCAACAACATATCTTCTCGCTGGATCAGCAGATCGCTAAGTTGAAGATCGCTGAAGAAGAACATAAG
GCGTTATTGACCCGCTTGACTGTGGTGGAGCAACTGCAGCAAAAACGCAATAAAACGACTGAGTTTATGAACCAAATGCC
CAACCTGATCCCTGAAGGCGTCTATGTCGACAAGATCAAGATGAATGGCCATCAGATAGAAATAACCGGGATTAGCGATT
CCACCGCTCGCTTGGCAACCATGCTCGATAACTTGGAGAAGTCGGACAAATTAACCGATGTTGAAATGCATGAAATCGTT
TCAGGGAATAAGCGATTTGGTAAGCAATTTCAGAGCTTTAAAGTCTCCTTCCAAATTTTAACCCCAGCCTCTAACCCGCA
AGAGGGAGGTGCACACAATGGCTAG
ATGTTGCATAAGGTCAACTTACTGCCGTGGCGTGATGCACGGCGTGAAGCACATAAGCGGCGCTTTTTGGGGTTAGTGAC
ACTCGGTGTTTTACTGGCGGTGTTGATGCAATTTGCCGCAGGCGAATACTTGGGCGGACAAATGGCTTTGCAGCAAGAGC
GGATTGGTTATTTGCAACAACATATCTTCTCGCTGGATCAGCAGATCGCTAAGTTGAAGATCGCTGAAGAAGAACATAAG
GCGTTATTGACCCGCTTGACTGTGGTGGAGCAACTGCAGCAAAAACGCAATAAAACGACTGAGTTTATGAACCAAATGCC
CAACCTGATCCCTGAAGGCGTCTATGTCGACAAGATCAAGATGAATGGCCATCAGATAGAAATAACCGGGATTAGCGATT
CCACCGCTCGCTTGGCAACCATGCTCGATAACTTGGAGAAGTCGGACAAATTAACCGATGTTGAAATGCATGAAATCGTT
TCAGGGAATAAGCGATTTGGTAAGCAATTTCAGAGCTTTAAAGTCTCCTTCCAAATTTTAACCCCAGCCTCTAACCCGCA
AGAGGGAGGTGCACACAATGGCTAG
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| pilN | Vibrio cholerae strain A1552 |
99.485 |
100 |
0.995 |
| pilN | Vibrio campbellii strain DS40M4 |
60.452 |
91.237 |
0.552 |