Detailed information    

insolico Bioinformatically predicted

Overview

Name   pilZ   Type   Machinery gene
Locus tag   OXA91_RS07100 Genome accession   NZ_CP113438
Coordinates   1570238..1570579 (+) Length   113 a.a.
NCBI ID   WP_010947130.1    Uniprot ID   Q5ZVN9
Organism   Legionella pneumophila strain PATHC003     
Function   assembly of type IV pilus (predicted from homology)   
DNA binding and uptake

Genomic Context

Location: 1565238..1575579
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  OXA91_RS07070 (OXA91_07070) fabG 1565238..1565981 (+) 744 WP_407716501.1 3-oxoacyl-ACP reductase FabG -
  OXA91_RS07075 (OXA91_07075) acpP 1566066..1566314 (+) 249 WP_003631752.1 acyl carrier protein -
  OXA91_RS07080 (OXA91_07080) fabF 1566334..1567572 (+) 1239 WP_010947126.1 beta-ketoacyl-ACP synthase II -
  OXA91_RS07085 (OXA91_07085) mltG 1567573..1568571 (+) 999 WP_010947127.1 endolytic transglycosylase MltG -
  OXA91_RS07090 (OXA91_07090) tmk 1568571..1569209 (+) 639 WP_010947128.1 dTMP kinase -
  OXA91_RS07095 (OXA91_07095) - 1569206..1570111 (+) 906 WP_010947129.1 DNA polymerase III subunit delta' -
  OXA91_RS07100 (OXA91_07100) pilZ 1570238..1570579 (+) 342 WP_010947130.1 PilZ domain-containing protein Machinery gene
  OXA91_RS07105 (OXA91_07105) - 1570635..1571423 (+) 789 WP_015444530.1 TatD family hydrolase -
  OXA91_RS07110 (OXA91_07110) - 1571535..1572635 (+) 1101 WP_010947132.1 anhydro-N-acetylmuramic acid kinase -
  OXA91_RS07115 (OXA91_07115) - 1572691..1573983 (+) 1293 WP_010947133.1 MFS transporter -
  OXA91_RS07120 (OXA91_07120) - 1574059..1575339 (-) 1281 WP_010947134.1 MFS transporter -

Sequence

Protein


Download         Length: 113 a.a.        Molecular weight: 12521.54 Da        Isoelectric Point: 8.2421

>NTDB_id=762192 OXA91_RS07100 WP_010947130.1 1570238..1570579(+) (pilZ) [Legionella pneumophila strain PATHC003]
MTEKPQIINCSFPNEASLYMAYMPFVKGGGLFIRTQHVYSLGQSLELSVKLLNENEPYLVTGKIVWITPKGAQGNKPPGV
GIQFTGENSRYLCNKIETYLAGMLKSCQVTDTI

Nucleotide


Download         Length: 342 bp        

>NTDB_id=762192 OXA91_RS07100 WP_010947130.1 1570238..1570579(+) (pilZ) [Legionella pneumophila strain PATHC003]
ATGACCGAAAAACCACAGATTATAAACTGCTCATTTCCCAATGAAGCATCTTTGTACATGGCTTACATGCCTTTTGTGAA
AGGTGGCGGTCTTTTTATAAGAACTCAACACGTTTATTCTCTAGGGCAGTCGCTTGAATTATCTGTTAAATTGCTCAATG
AAAATGAACCATATTTGGTCACTGGTAAAATAGTCTGGATTACTCCTAAAGGTGCACAAGGTAATAAGCCGCCGGGAGTT
GGTATTCAATTTACCGGTGAAAACAGTCGTTATCTATGTAACAAGATAGAAACTTATTTGGCAGGAATGCTAAAATCATG
TCAGGTTACAGATACTATATAG

Domains

Predicted by InterproScan.

PilZ domain (PilZ)

(10-101)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB Q5ZVN9

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  pilZ Legionella pneumophila str. Paris

99.115

100

0.991
  pilZ Legionella pneumophila strain ERS1305867

99.115

100

0.991