Detailed information    

insolico Bioinformatically predicted

Overview

Name   recX   Type   Regulator
Locus tag   ORP33_RS04515 Genome accession   NZ_CP113256
Coordinates   891161..891955 (+) Length   264 a.a.
NCBI ID   WP_213415021.1    Uniprot ID   -
Organism   Bacillus subtilis strain K1     
Function   inhibit excessive RecA-mediated recombination (predicted from homology)   
Competence regulation

Genomic Context

Location: 886161..896955
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  ORP33_RS04485 (ORP33_04415) sxzA 887000..888031 (+) 1032 WP_003233568.1 FecCD family ABC transporter permease -
  ORP33_RS04490 (ORP33_04420) yfhB 888146..889027 (+) 882 WP_213415020.1 PhzF family phenazine biosynthesis isomerase -
  ORP33_RS04495 (ORP33_04425) yfhC 889115..889699 (+) 585 WP_003243940.1 nitroreductase family protein -
  ORP33_RS04500 (ORP33_04430) yfhD 889738..889929 (-) 192 WP_038428644.1 YfhD family protein -
  ORP33_RS04505 (ORP33_04435) yfhE 889996..890106 (-) 111 WP_003223230.1 YfhE family protein -
  ORP33_RS04510 (ORP33_04440) yfhF 890161..891072 (-) 912 WP_038428645.1 TIGR01777 family oxidoreductase -
  ORP33_RS04515 (ORP33_04445) recX 891161..891955 (+) 795 WP_213415021.1 recombination regulator RecX Regulator
  ORP33_RS04520 (ORP33_04450) yfhH 891957..892271 (+) 315 WP_003244592.1 YfhH family protein -
  ORP33_RS04525 (ORP33_04455) yfhI 892414..893607 (+) 1194 WP_072692836.1 MFS transporter -
  ORP33_RS04530 (ORP33_04460) sspK 893640..893792 (-) 153 WP_003223241.1 small, acid-soluble spore protein K -
  ORP33_RS04535 (ORP33_04465) yfhJ 893917..894186 (+) 270 WP_003243789.1 YfhJ family protein -
  ORP33_RS04540 (ORP33_04470) yfhK 894331..894849 (+) 519 WP_032677434.1 SH3 domain-containing protein -
  ORP33_RS04545 (ORP33_04475) spdL 894934..895266 (+) 333 WP_032677433.1 SdpC immunity protein SpdL -
  ORP33_RS04550 (ORP33_04480) ephM 895253..896113 (+) 861 WP_003233547.1 epoxide hydrolase EphM -

Sequence

Protein


Download         Length: 264 a.a.        Molecular weight: 31019.24 Da        Isoelectric Point: 6.9997

>NTDB_id=761232 ORP33_RS04515 WP_213415021.1 891161..891955(+) (recX) [Bacillus subtilis strain K1]
MPFITKISTQKKNTERFNIFLDDKYAFSVDADVLVKFELKKGKELDDLDIIEIQYGDEVKKGFNRALDFLSYRMRSTKEV
EDHLKKKETSPPVIAEVIHRLNDYKYLNDQEFASAYVSTHKKTNGKGPDVLFRELRAKGIDADTIKEALSSFSFEDQTRE
AVKHVEKLLKKDKKLSTKEFKQRAQLQLQRKGFSFDVISAAMDQIEYENDEDTEKEALRLHAEKAFRKYRYDGSYESAMK
VKQFLFRKGFSLDLIEQLLQEEEY

Nucleotide


Download         Length: 795 bp        

>NTDB_id=761232 ORP33_RS04515 WP_213415021.1 891161..891955(+) (recX) [Bacillus subtilis strain K1]
ATGCCGTTTATTACAAAAATATCAACGCAAAAAAAGAATACGGAACGCTTCAATATTTTTCTGGATGATAAATACGCCTT
CAGCGTGGACGCGGATGTGCTCGTGAAATTTGAGCTCAAGAAGGGAAAAGAACTCGATGATCTTGACATCATTGAGATTC
AATACGGCGATGAAGTGAAGAAAGGCTTCAACCGTGCGCTTGACTTTTTATCCTATCGAATGCGGTCGACGAAAGAGGTC
GAGGACCACTTAAAGAAAAAAGAAACCTCGCCCCCCGTCATTGCGGAAGTCATCCATAGGCTTAACGATTACAAGTACTT
AAACGACCAGGAATTTGCCTCAGCCTATGTCAGCACTCACAAAAAAACAAACGGAAAAGGCCCTGATGTTTTGTTCAGAG
AGCTAAGAGCGAAGGGAATTGATGCCGATACAATTAAGGAGGCGCTAAGTTCCTTTTCCTTTGAAGATCAGACAAGAGAA
GCGGTCAAGCATGTTGAAAAGCTTCTCAAAAAAGATAAAAAGCTTTCGACGAAAGAATTCAAACAGCGCGCCCAGCTGCA
GCTTCAGCGCAAGGGCTTCTCATTTGATGTTATCAGCGCGGCGATGGATCAGATTGAATATGAAAATGATGAAGACACAG
AGAAAGAAGCGCTGCGCCTTCACGCGGAAAAAGCGTTTAGAAAATACCGCTATGACGGCTCATATGAAAGCGCCATGAAG
GTCAAACAATTTTTATTCCGCAAAGGATTCTCACTCGATTTAATCGAGCAATTACTGCAGGAAGAGGAGTACTGA

Domains

Predicted by InterproScan.

RecX family (RecX_HTH2)

(84-204)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  recX Bacillus subtilis subsp. subtilis str. 168

98.864

100

0.989