Detailed information    

insolico Bioinformatically predicted

Overview


Name   pilZ   Type   Machinery gene
Locus tag   QJ983_RS10625 Genome accession   NZ_CP124666
Coordinates   2246600..2246956 (+) Length   118 a.a.
NCBI ID   WP_003091119.1    Uniprot ID   A0A0H2ZD30
Organism   Pseudomonas aeruginosa strain 2021CK-01283     
Function   assembly of type IV pilus (predicted from homology)   
DNA binding and uptake

Genomic Context


Location: 2241600..2251956
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  QJ983_RS10600 (QJ983_10600) fabF 2241812..2243056 (+) 1245 WP_031685638.1 beta-ketoacyl-ACP synthase II -
  QJ983_RS10605 (QJ983_10605) pabC 2243056..2243871 (+) 816 WP_003110198.1 aminodeoxychorismate lyase -
  QJ983_RS10610 (QJ983_10610) mltG 2243877..2244926 (+) 1050 WP_003130717.1 endolytic transglycosylase MltG -
  QJ983_RS10615 (QJ983_10615) tmk 2244955..2245587 (+) 633 WP_003091125.1 dTMP kinase -
  QJ983_RS10620 (QJ983_10620) - 2245580..2246566 (+) 987 WP_023875119.1 DNA polymerase III subunit delta' -
  QJ983_RS10625 (QJ983_10625) pilZ 2246600..2246956 (+) 357 WP_003091119.1 PilZ domain-containing protein Machinery gene
  QJ983_RS10630 (QJ983_10630) - 2246971..2247747 (+) 777 WP_003091117.1 TatD family hydrolase -
  QJ983_RS10635 (QJ983_10635) - 2247973..2249106 (-) 1134 WP_031685640.1 aminotransferase class V-fold PLP-dependent enzyme -
  QJ983_RS10640 (QJ983_10640) - 2249192..2249830 (+) 639 WP_003091114.1 TetR/AcrR family transcriptional regulator -
  QJ983_RS10645 (QJ983_10645) - 2249980..2250876 (+) 897 WP_282409969.1 radical SAM protein -
  QJ983_RS10650 (QJ983_10650) - 2250941..2251573 (+) 633 WP_003091112.1 DUF4823 domain-containing protein -

Sequence


Protein


Download         Length: 118 a.a.        Molecular weight: 12903.98 Da        Isoelectric Point: 9.9969

>NTDB_id=760749 QJ983_RS10625 WP_003091119.1 2246600..2246956(+) (pilZ) [Pseudomonas aeruginosa strain 2021CK-01283]
MSLPPNLGPRNGILSLTIKDKSVLYAAYMPFIRNGGLFIPTNKNYKLGDEVFMLLNLMEEPEKIPVAGKVVWITPKGAQG
NRAAGIGVQFNDGDNTARNKIETYLAGALKSDRPTHTM

Nucleotide


Download         Length: 357 bp        

>NTDB_id=760749 QJ983_RS10625 WP_003091119.1 2246600..2246956(+) (pilZ) [Pseudomonas aeruginosa strain 2021CK-01283]
ATGAGTTTGCCACCCAATCTGGGGCCGCGTAACGGCATCCTGTCCTTGACCATCAAGGACAAGTCCGTGCTGTACGCCGC
TTACATGCCGTTCATCAGGAACGGCGGGCTGTTCATTCCCACCAACAAGAACTACAAGCTCGGCGACGAGGTCTTCATGC
TGCTCAACCTGATGGAAGAGCCGGAGAAGATCCCGGTGGCCGGCAAGGTCGTCTGGATCACCCCGAAGGGCGCCCAGGGC
AACCGTGCGGCGGGCATCGGCGTGCAGTTCAACGACGGTGACAACACCGCCCGCAACAAGATCGAAACCTACCTGGCCGG
GGCGCTGAAGTCGGACCGGCCGACCCACACGATGTAA

Domains


Predicted by InterProScan.

(17-106)


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure
  AlphaFold DB A0A0H2ZD30

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  pilZ Legionella pneumophila str. Paris

49.074

91.525

0.449

  pilZ Legionella pneumophila strain ERS1305867

49.074

91.525

0.449