Detailed information    

insolico Bioinformatically predicted

Overview


Name   pilZ   Type   Machinery gene
Locus tag   P7I81_RS22235 Genome accession   NZ_CP124648
Coordinates   4732906..4733262 (+) Length   118 a.a.
NCBI ID   WP_003091119.1    Uniprot ID   A0A0H2ZD30
Organism   Pseudomonas aeruginosa strain 2020CK-00220     
Function   assembly of type IV pilus (predicted from homology)   
DNA binding and uptake

Genomic Context


Location: 4727906..4738262
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  P7I81_RS22210 (P7I81_22210) fabF 4728118..4729362 (+) 1245 WP_003104132.1 beta-ketoacyl-ACP synthase II -
  P7I81_RS22215 (P7I81_22215) pabC 4729362..4730177 (+) 816 WP_003091129.1 aminodeoxychorismate lyase -
  P7I81_RS22220 (P7I81_22220) mltG 4730183..4731232 (+) 1050 WP_033955214.1 endolytic transglycosylase MltG -
  P7I81_RS22225 (P7I81_22225) tmk 4731261..4731893 (+) 633 WP_003122486.1 dTMP kinase -
  P7I81_RS22230 (P7I81_22230) - 4731886..4732872 (+) 987 WP_003110200.1 DNA polymerase III subunit delta' -
  P7I81_RS22235 (P7I81_22235) pilZ 4732906..4733262 (+) 357 WP_003091119.1 PilZ domain-containing protein Machinery gene
  P7I81_RS22240 (P7I81_22240) - 4733277..4734053 (+) 777 WP_003091117.1 TatD family hydrolase -
  P7I81_RS22245 (P7I81_22245) - 4734279..4735412 (-) 1134 WP_023875121.1 aminotransferase class V-fold PLP-dependent enzyme -
  P7I81_RS22250 (P7I81_22250) - 4735498..4736136 (+) 639 WP_003091114.1 TetR/AcrR family transcriptional regulator -
  P7I81_RS22255 (P7I81_22255) - 4736303..4737199 (+) 897 WP_023875122.1 radical SAM protein -
  P7I81_RS22260 (P7I81_22260) - 4737264..4737896 (+) 633 WP_003091112.1 DUF4823 domain-containing protein -

Sequence


Protein


Download         Length: 118 a.a.        Molecular weight: 12903.98 Da        Isoelectric Point: 9.9969

>NTDB_id=759499 P7I81_RS22235 WP_003091119.1 4732906..4733262(+) (pilZ) [Pseudomonas aeruginosa strain 2020CK-00220]
MSLPPNLGPRNGILSLTIKDKSVLYAAYMPFIRNGGLFIPTNKNYKLGDEVFMLLNLMEEPEKIPVAGKVVWITPKGAQG
NRAAGIGVQFNDGDNTARNKIETYLAGALKSDRPTHTM

Nucleotide


Download         Length: 357 bp        

>NTDB_id=759499 P7I81_RS22235 WP_003091119.1 4732906..4733262(+) (pilZ) [Pseudomonas aeruginosa strain 2020CK-00220]
ATGAGTTTGCCACCCAATCTGGGGCCGCGTAACGGCATCCTGTCCTTGACCATCAAGGACAAGTCCGTGCTGTACGCCGC
CTACATGCCGTTCATCAGGAACGGCGGGCTGTTCATTCCCACCAACAAGAACTACAAGCTTGGCGACGAGGTCTTCATGC
TGCTCAACCTGATGGAAGAGCCGGAGAAGATCCCGGTGGCCGGCAAGGTCGTCTGGATCACCCCGAAGGGCGCCCAGGGC
AACCGTGCGGCGGGCATCGGCGTGCAGTTCAACGACGGTGACAACACCGCCCGCAACAAGATCGAAACCTACCTGGCCGG
GGCGTTGAAGTCGGACCGGCCGACCCACACGATGTAA

Domains


Predicted by InterProScan.

(17-106)


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure
  AlphaFold DB A0A0H2ZD30

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  pilZ Legionella pneumophila str. Paris

49.074

91.525

0.449

  pilZ Legionella pneumophila strain ERS1305867

49.074

91.525

0.449