Detailed information    

insolico Bioinformatically predicted

Overview

Name   braS   Type   Regulator
Locus tag   OS082_RS02215 Genome accession   NZ_CP113007
Coordinates   484986..485873 (+) Length   295 a.a.
NCBI ID   WP_000143418.1    Uniprot ID   -
Organism   Staphylococcus aureus strain Ryze     
Function   promote expression of competence genes (predicted from homology)   
Competence regulation

Genomic Context

Location: 479986..490873
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  OS082_RS02185 - 480718..481479 (+) 762 WP_000323448.1 alpha/beta hydrolase -
  OS082_RS02190 - 481724..482179 (+) 456 WP_000106185.1 MarR family winged helix-turn-helix transcriptional regulator -
  OS082_RS02195 - 482301..482402 (+) 102 WP_000731972.1 SE2200 family small protein -
  OS082_RS02200 - 482462..483886 (-) 1425 WP_000953739.1 alkaline phosphatase -
  OS082_RS02205 - 484084..484284 (+) 201 WP_000604727.1 hypothetical protein -
  OS082_RS02210 braR 484310..484975 (+) 666 WP_000697878.1 nisin susceptibility-associated two-component system response regulator NsaR Regulator
  OS082_RS02215 braS 484986..485873 (+) 888 WP_000143418.1 nisin susceptibility-associated two-component system sensor histidine kinase NsaS Regulator
  OS082_RS02220 - 485981..486736 (+) 756 WP_000923764.1 ABC transporter ATP-binding protein -
  OS082_RS02225 - 486733..488733 (+) 2001 WP_000776744.1 ABC transporter permease -
  OS082_RS02230 - 489409..489522 (+) 114 WP_014937089.1 hypothetical protein -
  OS082_RS02235 - 489904..490164 (+) 261 WP_001791293.1 hypothetical protein -
  OS082_RS02240 - 490174..490671 (+) 498 WP_001065267.1 glutathione peroxidase -
  OS082_RS02245 - 490779..490871 (-) 93 WP_031774855.1 hypothetical protein -

Sequence

Protein


Download         Length: 295 a.a.        Molecular weight: 34105.41 Da        Isoelectric Point: 5.8962

>NTDB_id=758961 OS082_RS02215 WP_000143418.1 484986..485873(+) (braS) [Staphylococcus aureus strain Ryze]
MTFLKSITQEIAIVIVIFALFGLMFYLYHLPLEAYLLALGVILLLLLIFIGIKYLSFVKTISQQQQIENLENALYQLKNE
QIEYKNDVESYFLTWVHQMKTPITAAQLLLERDEPNVVNRVRQEVIQIDNYTSLALSYLKLLNETSDISVTKISINNIIR
PIIMKYSIQFIDQKTKIHYEPCHHEVLTDVRWTSLMIEQLINNALKYARGKDIWIEFDEQFNQLYVKDNGIGISEADLPK
IFDKGYSGYNGQRQSNSSGIGLFIVKQISTHTNHPVSVVSKQNEGTTFTIQFPDE

Nucleotide


Download         Length: 888 bp        

>NTDB_id=758961 OS082_RS02215 WP_000143418.1 484986..485873(+) (braS) [Staphylococcus aureus strain Ryze]
ATGACCTTTCTTAAAAGTATTACTCAGGAAATAGCAATAGTCATAGTTATTTTTGCTTTATTTGGCTTAATGTTTTACCT
GTATCATTTGCCATTAGAAGCATATTTACTAGCACTTGGCGTTATTTTATTATTATTACTCATATTCATAGGTATTAAAT
ATTTAAGTTTTGTAAAAACTATAAGCCAACAACAACAAATTGAAAATTTAGAAAATGCGTTGTATCAGCTTAAAAATGAA
CAAATTGAATATAAAAATGATGTAGAGAGCTACTTTTTAACATGGGTACATCAAATGAAAACACCCATTACTGCAGCACA
ACTGTTACTTGAAAGAGATGAGCCTAATGTTGTGAATCGTGTTCGTCAAGAGGTTATTCAAATTGATAACTATACAAGTT
TAGCACTTAGTTATTTAAAGTTATTAAATGAAACTTCTGATATTTCTGTCACTAAAATTTCGATTAACAATATCATTCGC
CCAATTATTATGAAATATTCAATACAGTTTATTGATCAAAAAACAAAAATCCATTATGAACCTTGTCATCACGAAGTATT
AACTGACGTTAGATGGACCTCTTTAATGATAGAACAATTAATAAATAATGCACTTAAGTATGCGAGAGGTAAAGATATAT
GGATTGAATTTGATGAGCAATTCAATCAATTATACGTAAAAGATAATGGTATCGGTATTAGTGAAGCGGACTTGCCTAAA
ATATTTGATAAGGGCTATTCAGGTTATAATGGCCAGCGGCAAAGTAACTCAAGTGGGATTGGTTTATTTATCGTAAAACA
AATTTCAACTCACACAAACCATCCTGTTTCAGTCGTATCTAAACAAAATGAGGGTACAACATTTACGATTCAATTTCCAG
ATGAATAA

Domains

Predicted by InterproScan.

Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase (HATPase_c)

(191-294)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  braS Staphylococcus aureus N315

98.983

100

0.99