Detailed information NTG0757947

Bioinformatically predicted

Overview

• Name: pilU
• Type: Machinery gene
• Locus tag: OPS05_RS15205
• Genome accession: NZ_CP111114
• Coordinates: 3421601..3422713 (-)
• Length: 370 a.a.
• NCBI ID: WP_134787593.1
• Uniprot ID: -
• Organism: Pseudomonas koreensis strain FP1691
• Function: assembly of type IV pilus (predicted from homology) DNA binding and uptake

Genomic Context

Location: 3416601..3427713

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
OPS05_RS15190 (OPS05_15190)	-	3417031..3418422 (+)	1392	WP_027612663.1	GntP family permease	-
OPS05_RS15195 (OPS05_15195)	hbdH	3418430..3419203 (+)	774	WP_047294787.1	3-hydroxybutyrate dehydrogenase	-
OPS05_RS15200 (OPS05_15200)	-	3419343..3421298 (+)	1956	WP_134786511.1	acetoacetate--CoA ligase	-
OPS05_RS15205 (OPS05_15205)	pilU	3421601..3422713 (-)	1113	WP_134787593.1	PilT/PilU family type 4a pilus ATPase	Machinery gene
OPS05_RS15210 (OPS05_15210)	-	3422847..3425396 (+)	2550	WP_134786512.1	PAS domain-containing protein	-
OPS05_RS15215 (OPS05_15215)	-	3425436..3425711 (+)	276	WP_003225447.1	peptidylprolyl isomerase	-
OPS05_RS15220 (OPS05_15220)	-	3425826..3426758 (-)	933	WP_134786513.1	sugar kinase	-

Sequence

Protein

• Length: 370 a.a.
• Molecular weight: 41203.07 Da
• Isoelectric Point: 6.6254

>NTDB_id=757947 OPS05_RS15205 WP_134787593.1 3421601..3422713(-) (pilU) [Pseudomonas koreensis strain FP1691]
MEIDALLLRLSSQHGSDLFLSTGAPPSARIDGVLTPFSERPFKPGEVETIANSMMDAEQRREFDRDLEMNLAISRTGIGR
FRVNIFKQRNDVSIVIRNVKLDIPRFEDLKLPPVLLETVMLKQGLILFVGATDSGKSTSLAALIDHRNRHSSGHIITIED
PVEYIHRHQRSIINQREVGVDTRSFHAALKNTLRQAPDVVLIGEIRDRETMEHALTFADTGHLVLSTLHAHNANQALDRI
VNLFPEERRPQLLHALGNNLKAFVSQRLVRTLDGQRRAAVEVMLGTPTIADLIRRNELGELKGIMEKSGEVGMQTFDAAL
YGLVVEGVISEDEALKHADSQNNLRLRLKLHTEAGPAPAPTTSGDWGLMD

Nucleotide

• Length: 1113 bp

>NTDB_id=757947 OPS05_RS15205 WP_134787593.1 3421601..3422713(-) (pilU) [Pseudomonas koreensis strain FP1691]
ATGGAAATCGATGCACTGTTGCTCCGTCTGTCGAGCCAGCACGGTTCTGACCTGTTCCTGTCCACGGGAGCGCCACCCAG
TGCGCGCATCGATGGCGTGCTGACGCCGTTCAGCGAGCGGCCGTTCAAGCCCGGCGAGGTCGAGACTATCGCCAACTCCA
TGATGGACGCCGAGCAACGGCGCGAGTTCGATCGGGATCTGGAAATGAACCTGGCGATTTCACGTACAGGCATCGGCCGT
TTTCGGGTGAACATCTTCAAGCAACGCAATGATGTGTCAATCGTAATCCGCAACGTCAAACTCGATATCCCGCGCTTCGA
AGACCTGAAACTGCCGCCGGTATTGCTGGAAACGGTGATGCTCAAACAGGGGCTGATCCTGTTCGTTGGCGCCACCGACT
CCGGCAAGTCCACTTCGCTGGCCGCGCTGATCGATCACCGCAACCGCCACAGCAGCGGGCACATCATCACCATCGAAGAC
CCGGTGGAGTATATCCATCGGCACCAGCGCTCGATCATCAATCAACGCGAAGTCGGCGTCGATACCCGCAGTTTCCATGC
GGCGCTGAAAAACACCCTGCGTCAGGCCCCGGATGTGGTGCTGATCGGCGAAATCCGTGACCGCGAAACCATGGAGCATG
CGCTGACATTCGCCGACACCGGGCACCTGGTGCTGTCGACGCTGCATGCGCACAACGCCAATCAGGCGCTGGACCGTATC
GTCAATCTGTTCCCCGAAGAACGCCGCCCGCAGTTGCTGCATGCGCTGGGCAACAATCTCAAGGCGTTCGTCTCGCAACG
GCTGGTGCGTACGCTGGACGGTCAGCGCCGGGCGGCGGTCGAGGTGATGCTCGGCACCCCGACCATCGCCGACCTGATCC
GCCGCAACGAATTGGGCGAACTCAAGGGCATCATGGAAAAGTCTGGCGAGGTCGGGATGCAGACCTTCGACGCGGCGCTG
TACGGGCTGGTGGTGGAGGGCGTGATCAGCGAAGACGAAGCGCTCAAGCATGCCGATTCGCAGAACAACCTGCGCCTGCG
TTTGAAACTGCACACCGAGGCGGGCCCGGCGCCCGCACCCACAACATCAGGCGACTGGGGCCTGATGGATTAA

Domains

Predicted by InterproScan.

• Type II/IV secretion system protein (T2SSE) (67-271)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
pilU	Pseudomonas stutzeri DSM 10701	56.78	95.676	0.543
pilU	Acinetobacter baylyi ADP1	53.221	96.486	0.514
pilU	Vibrio cholerae strain A1552	53.143	94.595	0.503
pilT	Deinococcus radiodurans R1 = ATCC 13939 = DSM 20539	41.317	90.27	0.373
pilT	Vibrio cholerae O1 biovar El Tor strain E7946	39.595	93.514	0.37
pilT	Vibrio cholerae strain A1552	39.595	93.514	0.37
pilT	Pseudomonas stutzeri DSM 10701	39.535	92.973	0.368
pilT	Pseudomonas aeruginosa PAK	39.244	92.973	0.365