Detailed information    

insolico Bioinformatically predicted

Overview

Name   recX   Type   Regulator
Locus tag   LFL98_RS04515 Genome accession   NZ_CP110365
Coordinates   884735..885529 (+) Length   264 a.a.
NCBI ID   WP_003243354.1    Uniprot ID   A0AAE2SGN5
Organism   Bacillus subtilis strain HY2-62     
Function   inhibit excessive RecA-mediated recombination (predicted from homology)   
Competence regulation

Genomic Context

Location: 879735..890529
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  LFL98_RS04485 (LFL98_04490) sxzA 880576..881607 (+) 1032 WP_273796215.1 iron ABC transporter permease -
  LFL98_RS04490 (LFL98_04495) yfhB 881722..882603 (+) 882 WP_277737009.1 PhzF family phenazine biosynthesis isomerase -
  LFL98_RS04495 (LFL98_04500) yfhC 882691..883275 (+) 585 WP_003243940.1 nitroreductase -
  LFL98_RS04500 (LFL98_04505) yfhD 883313..883504 (-) 192 WP_277737010.1 YfhD family protein -
  LFL98_RS04505 (LFL98_04510) yfhE 883571..883681 (-) 111 WP_003223230.1 YfhE family protein -
  LFL98_RS04510 (LFL98_04515) yfhF 883736..884647 (-) 912 WP_277737011.1 TIGR01777 family oxidoreductase -
  LFL98_RS04515 (LFL98_04520) recX 884735..885529 (+) 795 WP_003243354.1 recombination regulator RecX Regulator
  LFL98_RS04520 (LFL98_04525) yfhH 885531..885845 (+) 315 WP_003244592.1 YfhH family protein -
  LFL98_RS04525 (LFL98_04530) yfhI 885988..887181 (+) 1194 WP_080010604.1 MFS transporter -
  LFL98_RS04530 (LFL98_04535) sspK 887213..887365 (-) 153 WP_003223241.1 small, acid-soluble spore protein K -
  LFL98_RS04535 (LFL98_04540) yfhJ 887490..887759 (+) 270 WP_003243789.1 YfhJ family protein -
  LFL98_RS04540 (LFL98_04545) yfhK 887904..888422 (+) 519 WP_029317456.1 SH3 domain-containing protein -
  LFL98_RS04545 (LFL98_04550) spdL 888507..888824 (+) 318 WP_021481164.1 SdpC immunity protein SpdL -
  LFL98_RS04550 (LFL98_04555) ephM 888826..889686 (+) 861 WP_014479220.1 epoxide hydrolase EphM -

Sequence

Protein


Download         Length: 264 a.a.        Molecular weight: 31013.23 Da        Isoelectric Point: 6.6686

>NTDB_id=754596 LFL98_RS04515 WP_003243354.1 884735..885529(+) (recX) [Bacillus subtilis strain HY2-62]
MPFITKISTQKKNTERFNIFLDDKYAFSVDADVLVKFELKKGKELDDLDIIEIQYGDEVKKGFNRALDFLSYRMRSTKEV
EDHLKKKETSPPVIAEVIHRLNDYKYLNDQEFAAAYVSTHKKTNGKGPDVLFRELRAKGIDDDTIKEALSSFSFEDQTRE
AVKHVEKLLKKDKKLSTKELKQRAQLQLQRKGFSFDVISAAMDQIEYENDEDTEKEALRLHAEKAFRKYRYDGSYESAMK
VKQFLFRKGFSLDLIEQLLQEEEY

Nucleotide


Download         Length: 795 bp        

>NTDB_id=754596 LFL98_RS04515 WP_003243354.1 884735..885529(+) (recX) [Bacillus subtilis strain HY2-62]
ATGCCGTTTATTACAAAAATATCAACGCAAAAAAAGAATACGGAACGCTTCAATATTTTTCTGGATGATAAATACGCCTT
CAGCGTGGACGCGGATGTGCTCGTGAAATTTGAGCTCAAGAAGGGAAAAGAACTCGATGATCTTGACATCATTGAGATTC
AATACGGCGATGAAGTGAAGAAAGGCTTCAACCGTGCGCTTGACTTTTTATCCTATCGAATGCGGTCGACGAAAGAGGTC
GAGGACCACTTAAAGAAAAAAGAAACCTCGCCCCCCGTCATTGCGGAAGTCATCCATAGGCTTAACGATTACAAGTACTT
AAACGACCAGGAATTTGCCGCAGCCTATGTCAGCACTCACAAAAAAACAAACGGAAAAGGCCCTGATGTTTTGTTCAGAG
AGCTAAGAGCGAAGGGAATTGATGACGATACAATTAAGGAGGCGCTAAGTTCCTTTTCCTTTGAAGATCAGACAAGAGAA
GCGGTCAAGCATGTTGAAAAGCTTCTCAAAAAAGATAAAAAGCTTTCGACGAAAGAACTCAAACAGCGCGCCCAGCTGCA
GCTTCAGCGCAAGGGCTTCTCATTTGATGTTATCAGCGCGGCGATGGATCAGATTGAATATGAAAATGATGAAGACACAG
AGAAAGAAGCGCTGCGCCTTCACGCGGAAAAAGCGTTTAGAAAATACCGCTATGACGGCTCATATGAAAGCGCCATGAAG
GTCAAACAATTTTTATTCCGCAAAGGATTCTCACTCGATTTAATCGAGCAATTACTGCAGGAAGAGGAGTACTGA

Domains

Predicted by InterproScan.

RecX family (RecX_HTH2)

(84-204)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  recX Bacillus subtilis subsp. subtilis str. 168

100

100

1