Detailed information NTG0752291

Bioinformatically predicted

Overview

• Name: rapF
• Type: Regulator
• Locus tag: OKW88_RS12755
• Genome accession: NZ_CP110105
• Coordinates: 2492334..2493479 (+)
• Length: 381 a.a.
• NCBI ID: WP_015250985.1
• Uniprot ID: -
• Organism: Bacillus subtilis strain CF03
• Function: inhibit the DNA-binding function of ComA (predicted from homology) Competence regulation

Genomic Context

Location: 2487334..2498479

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
OKW88_RS12730 (OKW88_12710)	albF	2487350..2488630 (+)	1281	WP_032722698.1	pitrilysin family protein	-
OKW88_RS12735 (OKW88_12715)	albG	2488627..2489328 (+)	702	WP_015250988.1	antilisterial bacteriocin subtilosin biosynthesis protein AlbG	-
OKW88_RS12740 (OKW88_12720)	ywhL	2489334..2490710 (-)	1377	WP_015250987.1	YncE family protein	-
OKW88_RS12745 (OKW88_12725)	ywhK	2490749..2492104 (-)	1356	WP_342006500.1	YncE family protein	-
OKW88_RS12750	-	2492101..2492331 (-)	231	Protein_2516	hypothetical protein	-
OKW88_RS12755 (OKW88_12730)	rapF	2492334..2493479 (+)	1146	WP_015250985.1	response regulator aspartate phosphatase RapF	Regulator
OKW88_RS12760 (OKW88_12735)	phrF	2493463..2493582 (+)	120	WP_009968329.1	phosphatase RapF inhibitor PhrF	Regulator
OKW88_RS12765 (OKW88_12740)	-	2493680..2494141 (+)	462	Protein_2519	YbaK/EbsC family protein	-
OKW88_RS12770 (OKW88_12745)	speB	2494172..2495044 (-)	873	WP_342006499.1	agmatinase	-
OKW88_RS12775 (OKW88_12750)	speE	2495105..2495935 (-)	831	WP_003227543.1	spermidine synthase	-
OKW88_RS12780 (OKW88_12755)	pbpG	2496137..2498212 (+)	2076	WP_029726084.1	transglycosylase domain-containing protein	-

Sequence

Protein

• Length: 381 a.a.
• Molecular weight: 45590.06 Da
• Isoelectric Point: 5.0624

>NTDB_id=752291 OKW88_RS12755 WP_015250985.1 2492334..2493479(+) (rapF) [Bacillus subtilis strain CF03]
MTGVISSSSIGEKINEWYMYIRRFSIPDAEYLRREIKQELDQMEEDQDLHLYYSLMEFRHNLMLEYLEPLEKMRIEEQPR
LSDLLLEIDKKQARLTGLLEYYFNFFRGMYELDQREYLSAIKFFKKAESKLIFVKDRIEKAEFFFKMSESYYYMKQTYFS
MDYARQAYEIYKENEAYNIRLLQCHSLFATNFLDLKQYEDAVSHFQKAYSMAEAEKQPQLMGRTLYNIGLCKNSQSQYED
AIPYFKRAIAVFEESNILPSLPQAYFLITQIHYKLGKMDKAHEYHSKGMAYSQKAGDVIYLSEFEFLKSLYLSGPDEEAI
QGFFDFLESKMLYADLEDFAIDVAKYYHERKNFQKASAYFLKVEQVRQLIQGGVSLYEIEV

Nucleotide

• Length: 1146 bp

>NTDB_id=752291 OKW88_RS12755 WP_015250985.1 2492334..2493479(+) (rapF) [Bacillus subtilis strain CF03]
GTGACAGGTGTCATATCTTCTTCTTCCATCGGAGAAAAGATTAACGAATGGTATATGTACATACGCCGATTTAGCATACC
CGATGCAGAATATTTGCGACGAGAAATCAAGCAAGAGCTGGATCAAATGGAAGAAGATCAAGACCTTCATTTGTACTATT
CACTGATGGAGTTTCGGCACAACCTGATGCTTGAGTACCTTGAACCGTTAGAAAAAATGAGGATTGAGGAACAGCCGAGA
CTGTCTGATCTGCTGCTTGAGATTGATAAAAAACAGGCTCGTTTAACTGGTCTGCTTGAGTACTATTTTAATTTCTTCAG
AGGCATGTATGAGCTGGATCAGCGGGAATATCTGTCGGCTATTAAATTTTTCAAAAAGGCCGAAAGCAAGCTGATATTCG
TTAAGGATCGGATAGAGAAAGCTGAGTTTTTCTTTAAGATGTCTGAATCTTATTACTATATGAAACAAACGTATTTTTCA
ATGGACTATGCACGGCAAGCATATGAAATATACAAAGAAAATGAAGCTTATAATATAAGATTGCTGCAGTGTCATTCTTT
ATTTGCCACCAATTTTTTAGATTTAAAACAGTATGAGGATGCCGTCTCACATTTTCAAAAAGCTTATTCTATGGCAGAAG
CTGAAAAGCAGCCCCAATTAATGGGAAGAACTTTGTACAATATCGGGCTTTGTAAAAACAGCCAAAGCCAATATGAGGAT
GCCATACCTTATTTCAAAAGAGCAATAGCTGTTTTTGAAGAATCAAATATTCTTCCTTCCTTACCTCAAGCGTATTTTTT
AATTACACAGATCCATTATAAATTAGGAAAAATGGATAAAGCTCATGAATATCATAGTAAGGGAATGGCTTATTCACAAA
AGGCCGGAGATGTAATATATTTATCAGAGTTTGAATTTTTGAAATCTTTATACTTATCAGGCCCGGATGAAGAAGCAATT
CAAGGATTTTTTGATTTTCTCGAAAGTAAAATGTTGTATGCTGATCTTGAAGATTTCGCTATTGATGTGGCAAAATATTA
TCATGAACGTAAAAATTTTCAAAAAGCTTCTGCTTATTTTTTGAAGGTGGAACAAGTAAGGCAACTTATTCAAGGAGGAG
TGAGTTTGTATGAAATTGAAGTCTAA

Domains

Predicted by InterproScan.

• response regulator aspartate phosphatase H, N terminal (RapH_N) (4-65)

• Tetratricopeptide repeat (TPR_12) (223-290)

• Anaphase-promoting complex, cyclosome, subunit 3 (ANAPC3) (132-207)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
rapF	Bacillus subtilis subsp. subtilis str. 168	99.213	100	0.992
rapC	Bacillus subtilis subsp. subtilis str. 168	57.368	99.738	0.572