Detailed information NTG0748697

Bioinformatically predicted

Overview

• Name: dprA
• Type: Machinery gene
• Locus tag: OF800_RS06190
• Genome accession: NZ_CP109636
• Coordinates: 1231787..1232656 (+)
• Length: 289 a.a.
• NCBI ID: WP_264307787.1
• Uniprot ID: -
• Organism: Lactococcus garvieae strain Alexii-6_2
• Function: ssDNA binding; loading RecA onto ssDNA (predicted from homology) DNA processing

Genomic Context

Location: 1226787..1237656

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
OF800_RS06170 (OF800_06170)	-	1227115..1227735 (+)	621	WP_004257227.1	GntR family transcriptional regulator	-
OF800_RS06175 (OF800_06175)	-	1227940..1229142 (+)	1203	WP_014024780.1	glycine betaine/L-proline ABC transporter ATP-binding protein	-
OF800_RS06180 (OF800_06180)	-	1229135..1230859 (+)	1725	WP_004257235.1	ABC transporter permease/substrate binding protein	-
OF800_RS06185 (OF800_06185)	budA	1231002..1231700 (+)	699	WP_004257238.1	acetolactate decarboxylase	-
OF800_RS06190 (OF800_06190)	dprA	1231787..1232656 (+)	870	WP_264307787.1	DNA-processing protein DprA	Machinery gene
OF800_RS06195 (OF800_06195)	topA	1232845..1234995 (+)	2151	WP_023888984.1	type I DNA topoisomerase	-
OF800_RS06200 (OF800_06200)	trmFO	1235041..1236384 (+)	1344	WP_264307788.1	methylenetetrahydrofolate--tRNA-(uracil(54)- C(5))-methyltransferase (FADH(2)-oxidizing) TrmFO	-
OF800_RS06205 (OF800_06205)	-	1236457..1236678 (-)	222	WP_074749946.1	hypothetical protein	-

Sequence

Protein

• Length: 289 a.a.
• Molecular weight: 32833.97 Da
• Isoelectric Point: 9.5559

>NTDB_id=748697 OF800_RS06190 WP_264307787.1 1231787..1232656(+) (dprA) [Lactococcus garvieae strain Alexii-6_2]
MIRNFEILRLKKAGVSNLGILKLIDYQEKHEAKLTLRQLARIAEVKAVPNFIESYKSQDVKRLREQYKTFPSFSILDDIY
PEWLKEMYNPPTLLFYQGNLKFLNFPKLGFVGSREMSKEAPKITYKLIEELKQSFVIVSGLARGVDTSSHVAAIKQQTPT
IAVIGNGLDISYPKENRKLQEYLATHELVLSEYLVGEPPLKFHFPERNRIIAGLSRGIVVVEAKQRSGSLITSRYALEGN
REVFAVPGDILNRNASGCNQLIQQGAAKLITHGQDILDEFYLYEGNFLP

Nucleotide

• Length: 870 bp

>NTDB_id=748697 OF800_RS06190 WP_264307787.1 1231787..1232656(+) (dprA) [Lactococcus garvieae strain Alexii-6_2]
ATGATTAGAAATTTTGAAATATTGCGTTTGAAAAAAGCAGGAGTGTCGAATCTAGGGATTTTGAAACTGATTGACTATCA
AGAAAAGCATGAAGCAAAACTTACTTTACGACAGTTAGCGAGGATTGCAGAAGTCAAAGCTGTTCCTAATTTTATTGAGA
GTTACAAGAGTCAGGATGTGAAACGACTTCGAGAGCAATATAAGACCTTCCCTTCCTTTTCCATCTTAGACGACATTTAT
CCTGAATGGCTGAAAGAAATGTATAATCCCCCGACCCTCCTTTTTTATCAAGGAAATCTTAAGTTTCTTAACTTCCCTAA
ACTCGGATTTGTCGGGAGCCGTGAAATGTCTAAGGAAGCCCCTAAAATTACATACAAACTTATTGAGGAATTAAAACAAA
GCTTTGTTATAGTGAGCGGGTTAGCACGAGGTGTTGACACTTCTAGTCATGTAGCTGCTATAAAGCAACAAACACCAACC
ATTGCTGTCATTGGTAACGGTTTAGATATTAGTTATCCAAAAGAAAATCGTAAATTACAAGAGTATTTAGCAACTCATGA
ATTGGTTTTATCAGAATACCTTGTAGGAGAGCCGCCCCTTAAGTTTCATTTTCCAGAGAGAAATAGAATCATTGCGGGTC
TTTCTCGTGGAATTGTCGTTGTTGAAGCAAAGCAACGTAGCGGTAGCCTCATCACAAGTCGTTATGCCTTAGAGGGAAAT
AGAGAAGTCTTTGCTGTACCTGGAGATATTTTGAACAGAAATGCCTCTGGCTGTAATCAATTAATCCAGCAAGGTGCAGC
CAAGCTTATCACTCATGGTCAAGATATTTTGGATGAATTTTATTTATATGAAGGTAATTTCCTTCCTTAA

Domains

Predicted by InterproScan.

• DNA recombination-mediator protein A (DNA_processg_A) (74-271)

• DNA processing protein A sterile alpha motif domain (SAM_DprA) (2-63)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
dprA	Lactococcus lactis subsp. cremoris KW2	63.604	97.924	0.623
dprA	Streptococcus mutans UA159	55.197	96.54	0.533
dprA/cilB/dalA	Streptococcus pneumoniae Rx1	53.763	96.54	0.519
dprA/cilB/dalA	Streptococcus pneumoniae D39	53.763	96.54	0.519
dprA/cilB/dalA	Streptococcus pneumoniae R6	53.763	96.54	0.519
dprA/cilB/dalA	Streptococcus pneumoniae TIGR4	53.763	96.54	0.519
dprA/cilB/dalA	Streptococcus mitis SK321	53.763	96.54	0.519
dprA/cilB/dalA	Streptococcus mitis NCTC 12261	53.047	96.54	0.512
dprA	Haemophilus influenzae Rd KW20	37.329	100	0.377